Issues
- 1
HAPB3 calling
#191 opened by diegomd90 - 2
Calling CYP2D6 as *4/*4 instead of *4+*10/*4+*10
#189 opened by msilver727 - 4
- 2
- 10
CYP2D6 diplotypes with activity score `≥3.75` are not correctly annotated in CPIC JSON data resource
#171 opened by kuanyili - 2
HL7 support
#186 opened by markwoon - 0
- 1
PMID null in Pharmcat json report
#187 opened by soniafont - 11
ExecutionException due to UnexpectedStateException: Multiple Phenotypes for Gene CYP2C9
#180 opened by ngslabex - 1
Support for CPIC level C drugs
#185 opened by Bioinf-usr - 0
Duplicated CYP2D6 diplotypes in matcher JSONs
#184 opened by BinglanLi - 0
Build docker image for arm64
#181 opened by whaleyr - 0
Add warning to summary table
#163 opened by katrinsangkuhl - 1
Support multiple outside call files
#178 opened by whaleyr - 3
CFTR outside calls diplotype
#161 opened by Bioinf-usr - 0
PharmCAT Telemetry
#179 opened by markwoon - 0
- 1
Error running on Pharmacoscan data
#176 opened by anh151 - 0
Phased variants in multiple phase blocks produces Unknown/Unknown and/or other bugs.
#175 opened by holtjma - 4
OA and CNV Data from QuantStudio 12K Flex
#172 opened by Estefany2081 - 4
Recognizing as gVCF a standard VCF file
#174 opened by inti4digbi - 1
Discarded genotypes in report - reopen #128
#173 opened by krukanna - 2
- 9
Adding Genes to Pharmcat Report
#145 opened by pbrennan-mvz - 9
- 3
- 2
PharmCAT Annotation Error -- Triploid Genotypes
#167 opened by pbrennan-mvz - 1
Warfarin Workflow Discrepancy
#164 opened by Shreyaack - 3
Different genotypes for multiple genes
#162 opened by nbiesot - 3
Vcf preprocessor script
#160 opened by diegomd90 - 3
Missing CPIC version
#157 opened by krukanna - 7
Error parsing date
#159 opened by anh151 - 4
No CPIC variants found
#158 opened by Bioinf-usr - 2
2.8.1 DPYD: java.lang.ArrayIndexOutOfBoundsException: Index 2 out of bounds for length 2
#156 opened by hudja - 0
Update Galaxy on PharmCAT release
#143 opened by markwoon - 4
- 5
- 10
- 7
Outside calls error
#154 opened by Bioinf-usr - 5
parsing error: QUAL 'inf' is not a number
#147 opened by Dafnaa - 1
Phasing ambiguity question
#152 opened by anh151 - 1
Parameter for outside calls in pharmcat_pipeline
#151 opened by MarioCazalla - 2
- 9
Version 2.6.0 missing on Docker Hub
#148 opened by kuanyili - 3
G6PD - wrong function assignment for Mediterranean, Dallas, Panama, Sassari, Cagliari, Birmingham
#144 opened by snehaleela - 5
PharmCAT Bug in parsing multiallelic variants
#139 opened by anh151 - 6
Enhance preprocessor performance
#141 opened by anh151 - 2
pharmcat_vcf_preprocessor.py
#142 opened by lingyeah89658 - 0
Add PharmCAT Docker image to GCR/Artifact Repository
#140 opened by markwoon - 1
Does PharmCAT upload user data somewhere?
#138 opened by KraftRicardo