Pinned Repositories
5loci
aBayesQR
agglomUA
larger urban agglomerations
ClonalFrameML
ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes
courses
Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1
datasciencecoursera
This is the repository set up for the data science coursera course
datasharing
The Leek group guide to data sharing
GEA-dev
The GEA pipeline for characterizing E coli and Salmonella genomes
Hello-world
Phylloxera's Repositories
Phylloxera/5loci
Phylloxera/aBayesQR
Phylloxera/agglomUA
larger urban agglomerations
Phylloxera/ClonalFrameML
ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes
Phylloxera/courses
Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1
Phylloxera/datasciencecoursera
This is the repository set up for the data science coursera course
Phylloxera/datasharing
The Leek group guide to data sharing
Phylloxera/GEA-dev
The GEA pipeline for characterizing E coli and Salmonella genomes
Phylloxera/Hello-world
Phylloxera/learn
Phylloxera/hello-world-nayan
Phylloxera/MeFiT
Merging and Filtering Tool
Phylloxera/MetaCompare
MetaCompare
Phylloxera/mkl4deb
Adding the Intel MKL to a Debian / Ubuntu system via one simple script
Phylloxera/mocat2
Latest MOCAT2 version
Phylloxera/PA2-clarifying_instructions
Assignment 2: Step by step to understand the instructions
Phylloxera/PA3-tutorial
Assignment 3: tutorial
Phylloxera/PEIV13-dev
Development of the Paired End Illumina Variable 1-3 workflow
Phylloxera/Phylloxera
Config files for my GitHub profile.
Phylloxera/ProgrammingAssignment2
Repository for Programming Assignment 2 for R Programming on Coursera
Phylloxera/rsc-dev
Development of rnaseq pipeline
Phylloxera/SEAR
Search Engine for Antimicrobial Resistance
Phylloxera/singularity-catalog
The Singularity Community Catalog of Singularity* recipe files.
Phylloxera/SpecLibExample
Example OrgMassSpecR Mass Spectral Library
Phylloxera/srst2
Short Read Sequence Typing for Bacterial Pathogens
Phylloxera/vcftools
A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project.