PoisonAlien/maftools

Issues

• Multiple AA changes from different transcripts

  #1080 opened 2 months ago
  0

• Installation: "Snpcounts.c:82:3: error: ‘for’ loop initial declarations are only allowed in C99 mode"

  #1079 opened 2 months ago
  1

• Rightbardata retrieval and used to as leftBrData

  #1078 opened 2 months ago
  5

• somaticInteractions - co-occurrence data not adding up

  #1077 opened 2 days ago
  3

• After sorted by one of sample annotations, is main plot sorted by mutation by that annotation

  #1075 opened 3 months ago
  10

• Multiple separate Gistic results from 3 cohorts

  #1074 opened 3 months ago
  3

• Error when using mafSurvival with TCGA samples

  #1073 opened 3 months ago
  2

• somaticInteractions top not count cn samples when plotting

  #1072 opened a month ago
  2

• An error occurred while generating oncoplots

  #1071 opened a month ago
  3

• Add gridlines(boxes) in main area only

  #1069 opened 20 days ago
  4

• Reading subset Maf with whole copy number data.

  #1068 opened a month ago
  3

• Discrepency in Sample Numbers.

  #1067 opened a month ago
  3

• gistic : Error in file.info(file) : invalid filename argument

  #1066 opened a month ago
  3

• Label on right Bar is always the same independent of the data added

  #1065 opened a month ago
  3

• Applying inferHeterogeneity to ClonEvol

  #1063 opened 4 months ago
  1

• Allow 2 Variant_Classification shown on Oncoplot

  #1062 opened 4 months ago
  20

• coOncoplot keepGeneOrder do not work in maftools 2.21.2

  #1061 opened 4 months ago
  2

• How to calculate the p-value between the mutation profiles for the 3 groups

  #1059 opened 2 months ago
  3

• No non-synonymous mutations found

  #1058 opened 4 months ago
  2

• Copy number analysis using ASCAT

  #1057 opened 4 months ago
  3

• The variants are almost Silent

  #1056 opened 2 months ago
  3

• Cannot find function Oncogenic Pathways

  #1055 opened 2 months ago
  3

• Questions of GISTIC and copy number alteration analysis

  #1054 opened 2 months ago
  3