Puzzled-Hui

ATM-22-Related-Work

[MedIA 2023/MICCAI 2022 Grand Challenge]: Airway Tree Modeling (ATM'22) Related Work Collections, also includes the state-of-the-art works on pulmonary airway segmentation and related works.

CFDA

[MICCAI, 2022, Student Travel Award]: CFDA_Collaborative Feature Disentanglement and Augmentation for Pulmonary Airway Tree Modeling of COVID-19 CTs

Connectivity-Aware-Airway-Segmentaion

[IEEE JBHI 2024] Towards Connectivity-Aware Pulmonary Airway Segmentation

DGCI

[MICCAI 2024] Implicit Representation Embraces Challenging Attributes of Pulmonary Airway Tree Structures

ReShapeIT

ReShapeIT: Reliable Shape Interaction with Implicit Template for Anatomical Structure Reconstruction

AIIB-Fibrotic-Lung-Disease

[MICCAI 2023 Grand Challenge: AIIB, First Runner-up] Airway-Informed Quantitative CT Imaging Biomarker for Fibrotic Lung Disease

AttentionBased-MIS

[Medical Physics, 2021] Medical Image Segmentation Based on Attention mechanism(Fine-Tune for natural image[semantic/instance] segmentation)

Connectivity-Aware-Airway-Segmentation

[IEEE JBHI, 2023] Towards Connectivity-Aware Pulmonary Airway Segmentation

IMR-Aorta24-Solution

IMR-SummerSchool-Airway-2022

[Summer School, IMR, 2022] Airway Segmentation Tutorial

Puzzled-Hui/Connectivity-Aware-Airway-Segmentation

[IEEE JBHI, 2023] Towards Connectivity-Aware Pulmonary Airway Segmentation

Puzzled-Hui/AttentionBased-MIS

[Medical Physics, 2021] Medical Image Segmentation Based on Attention mechanism(Fine-Tune for natural image[semantic/instance] segmentation)

Puzzled-Hui/IMR-Aorta24-Solution

Puzzled-Hui/AIIB-Fibrotic-Lung-Disease

[MICCAI 2023 Grand Challenge: AIIB, First Runner-up] Airway-Informed Quantitative CT Imaging Biomarker for Fibrotic Lung Disease

Puzzled-Hui/IMR-SummerSchool-Airway-2022

[Summer School, IMR, 2022] Airway Segmentation Tutorial

Puzzled-Hui/Awesome-Learning-with-Label-Noise

A curated list of resources for Learning with Noisy Labels

Puzzled-Hui/Coronary-Artery-Tracking-via-3D-CNN-Classification

The PyTorch re-implement of a 3D CNN Tracker to extract coronary artery centerlines with state-of-the-art (SOTA) performance. (paper: 'Coronary artery centerline extraction in cardiac CT angiography using a CNN-based orientation classifier')

Puzzled-Hui/Lymph-Node-Mapping

[MICCAI 2023 Grand Challenge: LNQ, First Runner-up] Transfer Mapping for Clinically Relevant Lymph Nodes in The Mediastinal Area of CT data

Puzzled-Hui/3d-nii-visualizer

A NIfTI (nii.gz) 3D Visualizer using VTK and Qt5

Puzzled-Hui/batchgenerators

A framework for data augmentation for 2D and 3D image classification and segmentation

Puzzled-Hui/cayman

Cayman is a Jekyll theme for GitHub Pages

Puzzled-Hui/cmake-examples

Useful CMake Examples

Puzzled-Hui/FLARE2021-Baseline

[MICCAI 2021 Challenge] The official baseline model for MICCAI Challenge: Fast and Low GPU memory Abdominal oRgan sEgmentation (FLARE21)

Puzzled-Hui/medpy

Medical image processing in Python

Puzzled-Hui/puzzled-hui.github.io

Puzzled-Hui/DIF-Net

Deformed Implicit Field: Modeling 3D Shapes with Learned Dense Correspondence CVPR 2021

Puzzled-Hui/mmsegmentation

OpenMMLab Semantic Segmentation Toolbox and Benchmark.

Puzzled-Hui/MONAI

AI Toolkit for Healthcare Imaging

Puzzled-Hui/nnUNet

Puzzled-Hui/OneFormer

[Preprint] OneFormer: One Transformer to Rule Universal Image Segmentation.

Puzzled-Hui/pytorch-tutorial

PyTorch Tutorial for Deep Learning Researchers

Puzzled-Hui/SIFA

Puzzled-Hui/taichi

Puzzled-Hui/transferlearning

Everything about Transfer Learning and Domain Adaptation--迁移学习

Puzzled-Hui/ummkd

[TMI'20] Unpaired Multi-modal Segmentation via Knowledge Distillation

Puzzled-Hui/vmtk

the Vascular Modeling Toolkit