RJEGR
"Bioinformatician + Data analyst Junior" Wrangling genomic data through Colossians 1:16 in the heart.
UABC-CICESEBaja California, Mexico
Pinned Repositories
2nd-Workshop-in-Advanced-Bioinformatics
BM
notes, workflows, and parameters definition through either, metagenomic and transcriptomics procedures.
CORAL_PAPER
1st Transcriptome analysis of Pocillopora grandis
covid_mexico_tracker
A Shinny App for tracking COVID-19 cases in Mexico.
EDA-Transcriptomic
It is a exploratory data analysis (EDA) dashboard than can be used at leats with an DESeqDataSet class objects and csv metadata
Estadistica_UABC
Taller basado en las clases del Dr. Eduardo Santamaría del Angel, Ensenada Baja California verano 2020
fish_barcoding
Sequences resolution for fish species based on different fragments size region from the COI/COX gene
infovis
Dropping here some scripts in python and chunks in R than are useful for processing and visualizing data in bioinformatics
Small-RNASeq-data-analysis
Transcriptomics
RJEGR's Repositories
RJEGR/Transcriptomics
RJEGR/infovis
Dropping here some scripts in python and chunks in R than are useful for processing and visualizing data in bioinformatics
RJEGR/fish_barcoding
Sequences resolution for fish species based on different fragments size region from the COI/COX gene
RJEGR/Small-RNASeq-data-analysis
RJEGR/2nd-Workshop-in-Advanced-Bioinformatics
RJEGR/BM
notes, workflows, and parameters definition through either, metagenomic and transcriptomics procedures.
RJEGR/CORAL_PAPER
1st Transcriptome analysis of Pocillopora grandis
RJEGR/covid_mexico_tracker
A Shinny App for tracking COVID-19 cases in Mexico.
RJEGR/EDA-Transcriptomic
It is a exploratory data analysis (EDA) dashboard than can be used at leats with an DESeqDataSet class objects and csv metadata
RJEGR/Estadistica_UABC
Taller basado en las clases del Dr. Eduardo Santamaría del Angel, Ensenada Baja California verano 2020
RJEGR/Heart_Male_octopus
Aquí vamos a realizar el ensamble de datos de corazon sistémico de pulpo
RJEGR/Hybryd_Haliotis
RJEGR/IIIBSS
The III Summer School in Bioinformatics, organized by the Institute of Mathematics and the Institute of Neurobiology from UNAM Juriquilla, was placed from Sunday, June 10th to Sunday, June 24th, 2018 at the Centro Académico Cultural (CAC), UNAM Juriquilla.
RJEGR/IMIPAS-DATASET
RJEGR/integrity
RJEGR/July_2018_bioinfo
This is a Rcode chunks and documentation about how to visualize data from bioinformatic source. Enjoy!
RJEGR/Meiofauna
Database curation and data visualization support for Meiofauna metabarcoding data.
RJEGR/metagenomics
El enfoque del proyecto pipelines es hacer accesible al usuario el codigo y los metodos implementados para el analisis de amplicones 18s. Los metodos resuelven n perspectivas del enfoque biologico. La labor con el codigo consiste en automatizar (codigo funcionalizado y pulido) los analisis de datos 18s y CO1.
RJEGR/Nodipecten_subnodosus
RJEGR/OA-research
RJEGR/Porites_panamensis
RJEGR/prokaryotic-transcriptome-assembly
RJEGR/rjegr.github.io
RJEGR/sea_anemone_aiptasia_coral_symbiosis
RJEGR/templates
this is the chunck code to develope visualization (tables and plots) and stats from amplicon sequences processed by mothur and dada2 (by now)
RJEGR/Trinotate
Trinotate source code
RJEGR/vormir
omic data analysis and beyond
RJEGR/yellowtail_microbiome_under_diets
Exploratory data analysis for 16S-metagenomic (V4 amplicon) libraries sequencing with illumina Miniseq (2x250) from intestinal (Hindgut and Foregut) microbiota of the California yellowtail (Seriola dorsalis) by consuming high concentrations of garlic (Allium sativum) as a dietary ingredient.
RJEGR/ZOONOTIC_BACTERIAL_NETWORK