Proscope is a toolbox for examine proteins, developed by Xi Fu in Rabadan Lab, Program of Mathematical Genomics, Columbia University
mamba create -f environment.yml
# or
mamba install -c conda-forge -c bioconda matplotlib numpy pandas seaborn biopython tqdm xmlschema scipy nglview py3Dmol
# or
pip install -e .Usage example can be found in test folder.
To plot ES score for any human reference protein, use this Jupyter notebook. https://colab.research.google.com/github/fuxialexander/proscope/blob/master/ES_Score.ipynb