Pinned Repositories
dipy-dki-paper
CamCAN-dMRI-study
dipy
Diffusion MR Imaging in Python
dipy_workshop_2021
dwi_pca_denoising
In this repository, I am sharing the PCA denoising code implemented for my PhD thesis.
Free-water-elimination-DTI
Reproduce the artice Hoy et al. 2014 Optimization of a free water elimination two-compartment model for diffusion tensor imaging. Neuroimage 103:323-33. doi: 10.1016/j.neuroimage.2014.09.053
gibbs-removal
In this repository, I am sharing an algorithm to suppress Gibbs artefact.
PCAdenoising
In this repository I am sharing all the code used for my following study:
pybrain_dipy
Two days dipy workshop
Radial_Tensor_Kurtosis
RafaelNH's Repositories
RafaelNH/Free-water-elimination-DTI
Reproduce the artice Hoy et al. 2014 Optimization of a free water elimination two-compartment model for diffusion tensor imaging. Neuroimage 103:323-33. doi: 10.1016/j.neuroimage.2014.09.053
RafaelNH/pybrain_dipy
Two days dipy workshop
RafaelNH/gibbs-removal
In this repository, I am sharing an algorithm to suppress Gibbs artefact.
RafaelNH/dipy_workshop_2021
RafaelNH/dipy
Diffusion MR Imaging in Python
RafaelNH/dwi_pca_denoising
In this repository, I am sharing the PCA denoising code implemented for my PhD thesis.
RafaelNH/PCAdenoising
In this repository I am sharing all the code used for my following study:
RafaelNH/free-water-DKI
RafaelNH/CamCAN-dMRI-study
RafaelNH/dipy-dki-paper
RafaelNH/Radial_Tensor_Kurtosis
RafaelNH/DIPY_workshop
This repository contains the tutorials for the DIPY workshop
RafaelNH/dipy_workshop_2022
RafaelNH/disimpy
Massively parallel Monte Carlo diffusion MR simulator written in Python
RafaelNH/DKI_svoxel_examples
In this repo, I will generate diffusion-weighted signals of some simple single voxels to process DTI and DKI measures.
RafaelNH/fweDTI_SSvsMS
In this repository, I am sharing some code comparing the accuracy/precision of single-shell and multi-shell free water elimination DTI using synthetic signals.
RafaelNH/Hybrid-PCA
In this repository, I am showing how one can run the Hybrid PCA denoising. I also included the code to generate all figures of my presentation for the ESMRMB-ISMRM joint annual meeting.
RafaelNH/pyAFQ
Automated Fiber Quantification ... in Python
RafaelNH/reproducing-veraart2013
RafaelNH/ReScience-submission
ReScience submission repository