/Free-water-elimination-DTI

Reproduce the artice Hoy et al. 2014 Optimization of a free water elimination two-compartment model for diffusion tensor imaging. Neuroimage 103:323-33. doi: 10.1016/j.neuroimage.2014.09.053

Primary LanguageJupyter Notebook

Free-water-elimination-DTI

This repository contains all necessary functions to fit the free water elimination DTI (fwdti).

Manuscript with the implementation details can be found in the folder article, while an example of code usage can be found in folders code or notebooks.

Cite

If you use this code, please cite:

Henriques, Rafael Neto; Rokem, Ariel; Garyfallidis, Eleftherios; St-Jean, Samuel; Peterson, Eric Thomas; Correia, Marta Morgado. [Re] Optimization of a free water elimination two-compartment model for diffusion tensor imaging, ReScience, volume 3, issue 1, #2, 2017. doi:10.5281/zenodo.495237