RajLabMSSM/QTL-mapping-pipeline

group sQTLs by cluster OR gene

jackhump opened this issue · 1 comments

Complex genes will have multiple splicing clusters within them. In theory each cluster could have independent cis genetic regulation.

Therefore add an option in sQTL mapping to either group QTLs by gene (current approach) or by leafcutter cluster.

This may increase number of sQTLs found.

now added.