RareSeas

2017-dibsi-metagenomics

2017 DIBSI Metagenomics Workshop

2017-dsi-docker-may

2017-ucsc-metagenomics

Workshop materials for shotgun metagenomics

academic-keyword-occurrence

Extracts the historic word occurrence of a search term in academic papers

Adaptive-pathways-of-coral-populations-on-the-Great-Barrier-Reef

processed data and scripts to accompany the same-title paper

angsd

Program for analysing NGS data.

angsd-wrapper

A project for extending ANGSD

bacteria-archaea-traits

A synthesis of bacterial and archaeal phenotypic trait data

GIGAIII_bioinformatics_workshop

Tutorial materials for GIGA III bioinformatics workshop, Curaçao 19-21 October 2018

RareSeas/GIGAIII_bioinformatics_workshop

Tutorial materials for GIGA III bioinformatics workshop, Curaçao 19-21 October 2018

RareSeas/2017-dibsi-metagenomics

2017 DIBSI Metagenomics Workshop

RareSeas/2017-ucsc-metagenomics

Workshop materials for shotgun metagenomics

RareSeas/academic-keyword-occurrence

Extracts the historic word occurrence of a search term in academic papers

RareSeas/Adaptive-pathways-of-coral-populations-on-the-Great-Barrier-Reef

processed data and scripts to accompany the same-title paper

RareSeas/bacteria-archaea-traits

A synthesis of bacterial and archaeal phenotypic trait data

RareSeas/BiodiversityGenomics2021

To share video clip

RareSeas/BITMaB2-Tutorials

Workshop materials for the Second Benthic Invertebrates, Metagenomics, and Bioinformatics Workshop at the TAMUCC Harte Institute in Corpus Christi, TX (January 15-19, 2018)

RareSeas/Bringing-the-Power-of-Synthetic-Data-Generation-to-the-Masses

We aim to make it easier for biomedical researchers to access and customize synthetic sequence data for the purpose of sharing and testing analysis methods as well as training and collaboration

RareSeas/bvcn-binder-hmmgenie

Learn about how to contribute your own Genie to the MagicCave toolkit

RareSeas/bvcn-binder-magiclamp

Tutorial for the MagicCave toolkit

RareSeas/Differential-Expression-Analysis-and-Replication

Differential Expression Analysis and Replication

RareSeas/docker-stacks

Opinionated stacks of ready-to-run Jupyter applications in Docker.

RareSeas/dockerfile-r

using mybinder with R

RareSeas/epfl-osip-2017

Workshop for "Open Science in Practice" at EPFL

RareSeas/fetch_microbial_growth_temperatures

Code to go with the https://doi.org/10.1101/271569 publication. Downloads html pages from culture-collection centers and mines these for growth temperature data.

RareSeas/genometools

GenomeTools genome analysis system.

RareSeas/NCBI-Guide-to-Metagenomic-Data

Metagenomics Tutorial using NCBI SRA Data - thank you Cooper Park

RareSeas/NGS_Class_pull

Materials for Analyzing Next-Generation Sequencing (ANGUS) course.

RareSeas/Notebooks_and_Protocols

RareSeas/shiny-examples

RareSeas/single_cell_portal_core

FAIRifying single cell RNA-seq data. 2018 Bio-IT FAIR hackathon project.

RareSeas/Singularity

Singularity images for use on VACC

RareSeas/Test-SageMaker-Notebook

RareSeas/test-scanpy-workflow

Testing dockerized script that preprocesses 10X_genomics outputs from cell ranger and generates plots

RareSeas/TestBinder2017

RareSeas/topic-functional-annotation

A repository for the lessons and notebooks used for Binder tutorials

RareSeas/training-material

A collection of Galaxy-related training material

RareSeas/tuftsTutorials_format

A Collection of Tufts Research Technology Tutorials

RareSeas/Workflow-test