RickGelhausen/HRIBO

Replace gffread

Closed this issue · 3 comments

RickGelhausen commented
  • currently gffread is used for the generation of a stable gtf/gff file for further processing
  • gffread requires some post-processing
  • it might be easier to combine everything into one script
RickGelhausen commented

Might require some refinement.

  • which features are needed ?
  • misc_rna ?
  • mRNA ?
RickGelhausen commented

This has been exchanged a few versions ago.