RickGelhausen/HRIBO

config.yaml

RickGelhausen opened this issue · 3 comments

RickGelhausen commented
  • the genomeindexpath variable in the config file seems to be useless
RickGelhausen commented

the same seems to be true for the taxonomy I assume, as we do not use sortmeRNA anymore

RickGelhausen commented

maybe we should even allow the fastq filepath to be set by the user, instead of enforcing it.
ok this seems to be possible already, using the sample.tsv file

eggzilla commented

Custom paths to sample files are now possible