LinkedQTL
Simulation of two linked QTL in a single chromosome with varying number of markers, QTL location and effect sizes.
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data/
Directory contain main simulation data i.e. starting parameters. These are , the congenic marker maps, QTL effects and distances, and the random number generator's seed.
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src/
Source scripts
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cf2_d/ cf2_e/ cf2_o/ cf2_p/
Directores specific to the data generated by the simulation. The letter following the underscore stands for :
- d = data (unprocessed cross data)
- e = examples (fully saved subset of crosses and analysis)
- o = outputs (output QTL summary files)
- p = processed data (after succesfull analysis, files in cf2_d are moved to cf2_p)
LICENSE : Essentially BSD-3
README.md : this file