/MorphoOrganismos

Primary LanguageJupyter Notebook

MorphoOrganismos

Mathematical models of morphogenesis and pattern formation based on analysis of eigenfunctions.

Python

Using FEniCS finite element package to compute eigenfunctions on domains and solve RD equations. To use this code:

  1. Install Anaconda python distribution
  2. Create an environment as follows: conda create -n fenicsenv matplotlib fenics mshr jupyter
  3. Activate the environment: source activate fenicsenv
  4. Run the notebook: jupyter notebook

Matlab

This is old code used to test some ideas. Based on a coarse regular grid. Not really documented.