Outdated scanpy dependency
Opened this issue · 1 comments
maxim-h commented
Thank you for your cool package. I've been experimenting with it on my own data lately.
The issue that arose after installing it (from PyPI) is that the 'scanpy==1.4.6' dependency is quite outdated. Downgrade of scanpy caused some issues that scanpy team already fixed, i.e. scverse/scanpy#1486.
Could you bump the dependencies in order to avoid this issue?
AkilaRanjith commented
Thanks..
I am using this module for my analysis but it uses scanpy==1.4.6 if i use upgraded version of scanpy this program fails.
can you please update this scanpy version to recent ones.
Using this version i am not able to calculate the "pts" from scanpy it only works 1.8 above
T