SITRR

Pinned Repositories

• scenicplus

  SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) and single-cell chromatin accessibility (scATAC-seq) data.

  Language:Jupyter Notebook19232

• MultiVelo

  Multi-omic velocity inference

  Language:Python10711

• pycisTopic

  pycisTopic is a Python module to simultaneously identify cell states and cis-regulatory topics from single cell epigenomics data.

  Language:Jupyter Notebook5913

• cellranger-atac

  Language:Python189

SITRR's Repositories