SRHilz

SRHilz's Stars

• genomicsclass/labs

  Rmd source files for the HarvardX series PH525x

  Language:R2k380502k

• stephenturner/oneliners

  Useful bash one-liners for bioinformatics.

  1.9k15410518

• swcarpentry/swcarpentry

  A meta-repository to help navigate the many lessons and repos of the Software Carpentry Community

  573631104

• swcarpentry/shell-novice

  The Unix Shell

  Language:Shell39880551988

• gladstone-institutes/Bioinformatics-Workshops

  Workshops presented by the Gladstone Bioinformatics Core

  Language:HTML221232374

• macarthur-lab/gene_lists

  List of gene lists for genomic analyses.

  Language:Python21840480

• dlab-berkeley/Machine-Learning-in-R

  Workshop (6 hours): preprocessing, cross-validation, lasso, decision trees, random forest, xgboost, superlearner ensembles

  Language:CSS191181372

• 10XGenomics/supernova

  10x Genomics Linked-Read Diploid De Novo Assembler

  Language:C++6513725

• edsgard/trendsceek

  Identify genes with spatial expression trends in single-cell gene expression data

  Language:HTML507717

• lmweber/cytometry-clustering-comparison

  R scripts to reproduce analyses in our paper comparing clustering methods for high-dimensional cytometry data

  Language:R4510414

• datacarpentry/R-genomics

  Lesson on data analysis and visualization in R for genomics

  Language:HTML41265076

• SRHilz/GliomaAtlas3D

  A Shiny web app for visualizing genomic data from brain tumors in 3D.

  Language:R72294

• jieliu6/THEMIS

  Tumor Heterogeneity Extensible Modeling via an Integrative System

  Language:Java4221

• HenrikBengtsson/CostelloPSCNSeq

  R package: Parent-specific Copy-number Estimation Pipeline using HT-Seq Data

  Language:R35292

• SRHilz/exomeQualityPlots

  Scripts to generate plots of exome library and mutation calling quality stats.

  Language:R2331

• SRHilz/miRsift

  Sifting through high-throughput sequencing data to identify miRNAs with a regulatory impact.

  Language:R2100

• SRHilz/3DGliomaAnalysis

  All tidy data, analyses, and output for Hilz et al. 3D Glioma Atlas manuscript.

  Language:R1220