SandyRogers
Scientific software developer (mostly Python/Jupyter, Python/Django, and Javascript/React).
EMBL-EBICambridge, UK
Pinned Repositories
deciphon_web
React webapp to submit and retrieve jobs from Deciphon – a protein prediction tool for nanopore reads
genome-search
Microservice API for searching fragments against indexed genomes, using COBS. Provides the "search by gene" feature on MGnify's MAG catalogues.
holofood-database
HoloFood is a project investigating sustainable food production through hologenomics. This Django app is the data portal where samples and other datasets from the project are made publicly available.
mgnify-web
Parent repo for MGnify's (EMBL-EBI's metagenomics platform) API and web client. Designed for local development.
notebooks
MGnify documentation and Jupyter Lab notebooks to support downstream analysis of MGnify data (EMBL-EBI's metagenomics platform)
Contentful-Tags-Autocomplete-Extension
UI Extension for Contenful (CMS) to add an autocompleting tags widget to content types
signposting-chrome-extension
Chrome browser extensions to report the existence of signposting.org links in HTTP/HTML headers
SandyRogers's Repositories
SandyRogers/Contentful-Tags-Autocomplete-Extension
UI Extension for Contenful (CMS) to add an autocompleting tags widget to content types
SandyRogers/signposting-chrome-extension
Chrome browser extensions to report the existence of signposting.org links in HTTP/HTML headers
SandyRogers/F1-points-analysis
How much competition was there for F1 race points in each year? A jupyter notebook analysis.
SandyRogers/bhxiv-gen-pdf
Generate a PDF for BioHackrXiv.org
SandyRogers/CastRemoteDisplay-android
Google Cast Remote Display API sample for Android
SandyRogers/django-sass-processor
SASS processor to compile SCSS files into *.css, while rendering, or offline.
SandyRogers/ena-portal-ptarmigan
SandyRogers/extensions
Repository providing samples using the UI Extensions SDK
SandyRogers/fast-style-transfer
art + image -> stylized image ⚡🖥🎨🖼
SandyRogers/folk-rnn
folk music modelling with LSTM
SandyRogers/galaxy
Data intensive science for everyone.
SandyRogers/GoldfishBot
SandyRogers/HMMER-web-docs
HMMER web server documentation
SandyRogers/igv-jupyterlab
Integrate Genome Viewer for JupyterLab 3
SandyRogers/igv-notebook
Module for embedding igv.js in an IPython notebook
SandyRogers/jupyter-themes
Custom Jupyter Notebook Themes
SandyRogers/MetaPUF
SandyRogers/MetaPUF-c
SandyRogers/mgnify-tutorial
SandyRogers/ot-demo
Repository with technical tests and assessments used for Open Targets hiring
SandyRogers/pycronofy
A Python adapter for the Cronofy calendaring service
SandyRogers/sandyrogers.github.io
SandyRogers/textacy
NLP, before and after spaCy
SandyRogers/todomvc
Helping you select an MV* framework - Todo apps for Backbone.js, Ember.js, AngularJS, and many more
SandyRogers/tomlkit
Style-preserving TOML library for Python
SandyRogers/training-material
A collection of Galaxy-related training material
SandyRogers/wee-slack
A WeeChat plugin for Slack.com. Synchronizes read markers, provides typing notification, search, etc..