SaundersLab/marple

Issues

• Not running when pgt reads directory is empty

  #22 opened 3 months ago
  0

• Test and update Sr-/AvrSr-gene primers

  #21 opened 4 months ago
  0

• Issue with updating softwares

  #19 opened 4 months ago
  0

• Mamba error when trying to install

  #18 opened 7 months ago
  1

• Update fungicide gene references

  #17 opened 7 months ago
  1

• Identify mutations in fungicide-resistance genes

  #16 opened 4 months ago
  1

• modify transfer command

  #14 opened 10 months ago
  0

• Snakemake recipe broken -- dependency issue

  #13 opened a year ago
  1

• update pgt references

  #12 opened a year ago
  0

• add instructions to readme

  #11 opened a year ago
  0

• make threads used for raxml configurable in config file

  #10 opened a year ago
  1

• workflow should make "all" rather than "subset" by default

  #9 opened a year ago
  1

• R genes

  #8 opened 4 months ago
  0

• can we do remote telemetry/diagonistics?

  #7 opened 2 years ago
  0

• do not assume gzcat is installed

  #6 opened 2 years ago
  0

• make wrapper for running snakemake, creating dag, and creating rulegraph

  #5 opened 2 years ago
  1

• nextrstrain integration

  #4 opened 2 years ago
  1

• add installer

  #3 opened a year ago
  1

• add unit tests

  #2 opened 2 years ago
  1

• should get number of starting trees and bootstraps from filename

  #1 opened a year ago
  1