Pinned Repositories
BEEP
Bayesian Estimation of Epidemic Parameters using Model Based Proposals for MCMC
Covid_Simulation_Model
EcoSISTEM.jl
Julia package for running dynamic ecosystem and epidemiological simulations
modelling-software-checklist
A checklist to help developers of modelling software assess and communicate their level of confidence in the software implementation and its readiness to yield trustworthy results.
rampvis-api
Node and Python FastAPI based RESTful APIs. The APIs are used by (1) RAMPVIS user interface: https://github.com/ScottishCovidResponse/rampvis-ui and (2) RAMPVIS Infrastructure management user interface: https://github.com/saifulkhan/rampvis-ontology-management-ui
rampvis-ui
This is a React based RAMP VIS visualisation interface. This client uses the REST API: https://github.com/ScottishCovidResponse/rampvis-api
scrc-vis-analytical
This is a repository for the visual analytics prototypes built by the visualisation team
scrc-vis-modelling
This is a repository for collating the visual analytics applications built by the visualisation team to support the different modelling teams.
SCRCIssueTracking
Central issue tracking repository for all repos in the consortium
simple_network_sim
Adaptation of a simple network simulation model to COVID-19
SCRC's Repositories
ScottishCovidResponse/rampvis-ui
This is a React based RAMP VIS visualisation interface. This client uses the REST API: https://github.com/ScottishCovidResponse/rampvis-api
ScottishCovidResponse/EcoSISTEM.jl
Julia package for running dynamic ecosystem and epidemiological simulations
ScottishCovidResponse/rampvis-api
Node and Python FastAPI based RESTful APIs. The APIs are used by (1) RAMPVIS user interface: https://github.com/ScottishCovidResponse/rampvis-ui and (2) RAMPVIS Infrastructure management user interface: https://github.com/saifulkhan/rampvis-ontology-management-ui
ScottishCovidResponse/SCRCIssueTracking
Central issue tracking repository for all repos in the consortium
ScottishCovidResponse/simple_network_sim
Adaptation of a simple network simulation model to COVID-19
ScottishCovidResponse/BEEP
Bayesian Estimation of Epidemic Parameters using Model Based Proposals for MCMC
ScottishCovidResponse/Covid_Simulation_Model
ScottishCovidResponse/scrc-vis-modelling
This is a repository for collating the visual analytics applications built by the visualisation team to support the different modelling teams.
ScottishCovidResponse/Contact-Tracing-Model
Derived from the FMD model and contact data from Sibylle
ScottishCovidResponse/Covid19_EERAModel
Simple COVID-19 simulation model with ABC-smc inference
ScottishCovidResponse/DataRepository
Main data repository for parameter estimates stored in the SCRC data registry
ScottishCovidResponse/hugo_source_files
When pushes are made to this repository, a GitHub actions workflow automatically deploys source files to the website
ScottishCovidResponse/modelling-software-checklist
A checklist to help developers of modelling software assess and communicate their level of confidence in the software implementation and its readiness to yield trustworthy results.
ScottishCovidResponse/data_pipeline_api
API to access the data pipeline
ScottishCovidResponse/ScottishCovidResponse.github.io
Website containing information related to datasets, the data pipeline, and various other technical documents associated with the SCRC project
ScottishCovidResponse/scrc-vis-analytical
This is a repository for the visual analytics prototypes built by the visualisation team
ScottishCovidResponse/SEIR-Model
A simple parameterised Java SEIR
ScottishCovidResponse/SimulationData.jl
Prototype lightweight datadependency package for Simulation.jl.
ScottishCovidResponse/covid-sim
A fork of Imperial's COVID-19 model to adapt to our data
ScottishCovidResponse/covid-uk
A fork of LSHTM's COVID-19 model to adapt to our data
ScottishCovidResponse/cpp-data-pipeline
C++ Wrapper for Python API
ScottishCovidResponse/data_pipeline_api_cpp
C++ client API for data management pipeline
ScottishCovidResponse/EnsembleVis
ScottishCovidResponse/fdp
A CLI tool for the FAIR Data Pipeline
ScottishCovidResponse/hugo-book
Hugo documentation theme as simple as plain book
ScottishCovidResponse/inference-for-contact-tracing-model
Parameter generation and sensitivty analysis for Scottish Covid
ScottishCovidResponse/SCRCdata
Processing scripts and templates for the SCRC data pipeline
ScottishCovidResponse/SCRCshinyApp
Shiny app for visualising data (SCRC)
ScottishCovidResponse/SimpleContactTracing.jl
Simple partner to the java contact tracing repository
ScottishCovidResponse/temporary_data
Temporary example data repository