ShyamieG

Pinned Repositories

agar22
AGAR Workshop, 2022
Language:Jupyter Notebook5 6 05
SLiM
SLiM is a genetically explicit forward simulation software package for population genetics and evolutionary biology. It is highly flexible, with a built-in scripting language, and has a cross-platform graphical modeling environment called SLiMgui.
Language:C++164 16 32133
CurrBiol_Ethiopians
Additional plots and code used in Gopalan et al. Current Biology
Language:Python0 1 00
methylation_array_processing
Scripts for processing Illumina methylation array data (from idat files)
Language:R0 1 00
misc_scripts
A collection of scripts for processing genetic data
Language:R0 2 00
msprime_sims
Debugging msprime sims with WF
Language:Python0 1 00
RMsim
Language:R0 1 00
snakemake_rnaseq
Language:Python0 0 00
msprime
Simulate genealogical trees and genomic sequence data using population genetic models
Language:Python178 19 1k87
tskit
Population-scale genomics
Language:Python157 12 1.2k73

ShyamieG's Repositories

ShyamieG/CurrBiol_Ethiopians
Additional plots and code used in Gopalan et al. Current Biology
Language:Python0 1 00
ShyamieG/methylation_array_processing
Scripts for processing Illumina methylation array data (from idat files)
Language:R0 1 00
ShyamieG/misc_scripts
A collection of scripts for processing genetic data
Language:R0 2 00
ShyamieG/msprime_sims
Debugging msprime sims with WF
Language:Python0 1 00
ShyamieG/RMsim
Language:R0 1 00
ShyamieG/snakemake_rnaseq
Language:Python0 0 00