Pinned Repositories
Canopy
Python package canopy loads the SomaLogic, Inc. proprietary data file called an *.adat. The package provides auxiliary functions for extracting relevant information from the ADAT object once in the Python environment. Basic familiarity with the Python environment is assumed, as is the ability to install contributed packages from the Python Package Installer (pip)
ProViz
ProViz is a basic data visualization and analysis tool developed at SomaLogic. ProViz imports an ADAT file (SomaLogic's data file format) and allows users to perform various exploratory data analytic processes.
SomaDataIO
The SomaDataIO package loads and exports 'SomaScan' data via the 'SomaLogic Operating Co., Inc.' proprietary data file, called an ADAT ('*.adat'). The package also exports auxiliary functions for manipulating, wrangling, and extracting relevant information from an ADAT object once in memory.
SomaLogic-Data
The 'example_data.adat' is intended to provide existing and prospective SomaLogic customers an example data file to enable analysis preparation prior to receipt of their 'SomaScan' data, and also for those generally curious about the 'SomaScan' data deliverable. It is *not* intended to be used as a control group for studies.
SomaPlotr
A highly specialized suite of standardized plotting routines based on the "Grammar of Graphics" framework of mapping variables to aesthetics used in 'ggplot2'. Graphics types are biased towards visualizing SomaScan (proteomic) data.
SomaScan.db
An R package providing extended biological annotations for the SomaScan Assay, a proteomics platform developed by SomaLogic Operating Co., Inc.
SomaScanWorkflows
somatemplate
Provides a customized, cohesive website template for open-source R packages developed by SomaLogic Operating Co., Inc.
SomaLogic's Repositories
SomaLogic/SomaDataIO
The SomaDataIO package loads and exports 'SomaScan' data via the 'SomaLogic Operating Co., Inc.' proprietary data file, called an ADAT ('*.adat'). The package also exports auxiliary functions for manipulating, wrangling, and extracting relevant information from an ADAT object once in memory.
SomaLogic/Canopy
Python package canopy loads the SomaLogic, Inc. proprietary data file called an *.adat. The package provides auxiliary functions for extracting relevant information from the ADAT object once in the Python environment. Basic familiarity with the Python environment is assumed, as is the ability to install contributed packages from the Python Package Installer (pip)
SomaLogic/SomaLogic-Data
The 'example_data.adat' is intended to provide existing and prospective SomaLogic customers an example data file to enable analysis preparation prior to receipt of their 'SomaScan' data, and also for those generally curious about the 'SomaScan' data deliverable. It is *not* intended to be used as a control group for studies.
SomaLogic/ProViz
ProViz is a basic data visualization and analysis tool developed at SomaLogic. ProViz imports an ADAT file (SomaLogic's data file format) and allows users to perform various exploratory data analytic processes.
SomaLogic/SomaPlotr
A highly specialized suite of standardized plotting routines based on the "Grammar of Graphics" framework of mapping variables to aesthetics used in 'ggplot2'. Graphics types are biased towards visualizing SomaScan (proteomic) data.
SomaLogic/SomaScan.db
An R package providing extended biological annotations for the SomaScan Assay, a proteomics platform developed by SomaLogic Operating Co., Inc.
SomaLogic/SomaScanWorkflows
SomaLogic/somatemplate
Provides a customized, cohesive website template for open-source R packages developed by SomaLogic Operating Co., Inc.