Starlitnightly/omicverse
A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.
Jupyter NotebookGPL-3.0
Issues
- 1
an error about cnmf_obj
#147 opened - 1
ov.single.cytotrace2 function error
#146 opened - 1
module 'numpy' has no attribute 'int'.
#145 opened - 0
- 2
cnmf_obj.get_results()function error
#143 opened - 4
ov.utils.cluster function error
#142 opened - 1
Kernel crash
#141 opened - 2
- 1
'cNMF' object has no attribute 'get_results'
#139 opened - 1
- 4
- 7
ov.pl.cpdb_heatmap function error
#136 opened - 1
- 1
- 1
Files used in the TCGA notebook
#133 opened - 2
can't use gpu mode
#132 opened - 3
- 2
Enrichment analysis of non-model plants
#130 opened - 2
MDE in preprocess is not perfect
#129 opened - 0
- 3
- 3
Conflict on pertpy and omicverse
#126 opened - 1
Problem with the model in paper
#125 opened - 1
omicverse_gpu
#124 opened - 1
docker image require
#121 opened - 2
- 0
- 1
Bugs about ov.space.svg
#117 opened - 1
ov.single.cytotrace2 bug
#115 opened - 2
- 6
- 4
max_workers error in cytotrace2
#111 opened - 3
- 1
ov.pl.cpdb_group_heatmap error
#109 opened - 1
Updated content of version 1.6.6
#108 opened - 4
the error cNMF
#107 opened - 2
Confusion about batch correction
#106 opened - 3
- 2
- 0
Updated content of version 1.6.4
#103 opened - 3
n_pcs bus in harmony of batch_correction
#102 opened - 9
- 9
- 2
Data lost with STAGATE_pyG
#98 opened - 0
- 3
Request for TCGA analysis
#95 opened - 3
- 2
- 0
Added `plot_spatial` like cell2location
#89 opened - 0