Issues
- 8
Bioconductor review
#44 opened by Syksy - 1
Risk score benchmarking
#21 opened by Syksy - 1
Xenabrowser mapping not up to date
#35 opened by Syksy - 1
cBioPortal hg19 to hg38 liftOver
#36 opened by Syksy - 1
- 2
List of methods/packages for downstream processing and appending to corresponding fields in pData
#8 opened by Syksy - 2
Purity Estimates
#19 opened by jccostel - 1
Benchmarking description
#24 opened by ACSoupir - 1
- 1
colData does not work for MAE Barwick
#34 opened by varsha090597 - 1
Cibersort results for Weiner et al. missing
#33 opened by Syksy - 0
Weiner et al. & newly generated GEX for CIBERSORTx
#32 opened by Syksy - 1
- 4
duplicate gene id in TCGA GEX
#14 opened by jccostel - 2
CNA and fusion sample size different in TCGA
#30 opened by MikeOrman - 1
- 1
Fusion status
#29 opened by MikeOrman - 2
Splitting apart OSF portion of TCGA
#18 opened by Syksy - 1
Double-checking ranks of newly normalized data
#25 opened by Syksy - 1
GEX and CNA objects
#12 opened by jccostel - 1
- 1
Include normal samples in Taylor et al.
#26 opened by Syksy - 2
Sample IDs in Clinical data - Taylor et.al.
#28 opened by varsha090597 - 4
ENSG ids in Friedrich
#15 opened by Syksy - 1
- 2
- 4
meeting notes
#7 opened by jhcreed - 2
To do list
#5 opened by jhcreed - 2
Package fails to build
#16 opened by varsha090597 - 2
script data mismatch
#4 opened by jhcreed - 1
missing template information
#3 opened by jhcreed - 3
- 2
Taylor gex data
#2 opened by jhcreed