Resources of SAF Evaluation

  • This repository provides resources for the evaluations of SAF.

Resources for Evaluations on Automata Networks

Name File(asp) File(an) #Automata #Transition Attractors ASP SAF(S) SAF(E)
Example .lp .an 4 12 1(3):2(1):4(1) asp SAF(S) SAF(E)
Lambda phage .lp .an 4 46 1(1):2(1) asp SAF(S) SAF(E)
Trp-reg .lp .an 4 14 1(2):4(1) asp SAF(S) SAF(E)
Fission-yeast .lp .an 9 43 1(1) asp SAF(S) SAF(E)
Mamm. .lp .an 10 34 1(1) asp SAF(S) SAF(E)
Tcrsig .lp .an 40 85 1(8) asp SAF(S) SAF(E)
FGF .lp .an 59 102 1(1536) asp SAF(S) SAF(E)
T-helper .lp .an 101 316 1(5875504) asp SAF(S) SAF(E)
star02 .lp .an 2 4 3(1) asp SAF(S) SAF(E)
star03 .lp .an 3 6 4(1) asp SAF(S) SAF(E)
star04 .lp .an 4 8 5(1) asp SAF(S) SAF(E)
star05 .lp .an 5 10 6(1) asp SAF(S) SAF(E)
star06 .lp .an 6 12 7(1) asp SAF(S) SAF(E)
star07 .lp .an 7 14 8(1) asp SAF(S) SAF(E)
star08 .lp .an 8 16 9(1) asp SAF(S) SAF(E)
star09 .lp .an 9 18 10(1) asp SAF(S) SAF(E)
star10 .lp .an 10 20 11(1) asp SAF(S) SAF(E)
star11 .lp .an 11 22 12(1) asp SAF(S) SAF(E)
star12 .lp .an 12 24 13(1) asp SAF(S) SAF(E)
star13 .lp .an 13 26 14(1) asp SAF(S) SAF(E)
star14 .lp .an 14 28 15(1) asp SAF(S) SAF(E)
star15 .lp .an 15 30 16(1) asp SAF(S) SAF(E)
star16 .lp .an 16 32 17(1) asp SAF(S) SAF(E)
star17 .lp .an 17 34 18(1) asp SAF(S) SAF(E)
star18 .lp .an 18 36 19(1) asp SAF(S) SAF(E)
star19 .lp .an 19 38 20(1) asp SAF(S) SAF(E)
star20 .lp .an 20 40 21(1) asp SAF(S) SAF(E)
star30 .lp .an 30 60 31(1) asp SAF(S) SAF(E)
star40 .lp .an 40 80 41(1) asp SAF(S) SAF(E)
star50 .lp .an 50 100 51(1) asp SAF(S) SAF(E)

Resources for Evaluations on Boolean Networks

Name File(boolsim) File(boolannet) File(bnet) File(an) #Var Boolsim Cabean Pyboolnet Pystablemotifs SAF(S) SAF(E)
T-Cell 2006 .boolsim .bnet .booleannet .an 40 boolsim cabean pyboolnet pystablemotifs SAF(S) SAF(E)
ABA .boolsim .bnet .booleannet .an 44 boolsim cabean pyboolnet pystablemotifs SAF(S) SAF(E)
T-LGL .boolsim .bnet .booleannet .an 61 boolsim cabean pyboolnet pystablemotifs SAF(S) SAF(E)
EMT .boolsim .bnet .booleannet .an 69 boolsim cabean pyboolnet pystablemotifs SAF(S) SAF(E)
T-Cell 2007 .boolsim .bnet .booleannet .an 101 boolsim cabean pyboolnet pystablemotifs SAF(S) SAF(E)
T-helper (BN) .boolsim .bnet .booleannet .an 103 boolsim cabean pyboolnet pystablemotifs SAF(S) SAF(E)

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