Tastulek

Tastulek's Stars

• DReichLab/adna-workflow

  Workflow for processing Illumina sequencing runs for ancient human DNA

  Language:Python173

• OSGConnect/tutorial-bwa

  Language:Shell24

• stschiff/compPopGenWorkshop2019_docs

  Repository with documentation file of our Jan 22-24 workshop on Computational Population Genetics in Jena, Germany.

  Language:Jupyter Notebook113

• genomicsclass/labs

  Rmd source files for the HarvardX series PH525x

  Language:R2k1.9k

• rmcelreath/stat_rethinking_2023

  Statistical Rethinking Course for Jan-Mar 2023

  Language:R2.2k248

• rmcelreath/stat_rethinking_2022

  Statistical Rethinking course winter 2022

  Language:R4.1k445

• tskit-dev/tskit

  Population-scale genomics

  Language:Python15371

• grbot/HUPAN

  Human pan-genome analysis pipeline

  Language:AMPL32

• gpc-gr/panel3552-scripts

  Language:Python1

• DReichLab/EIG

  Eigen tools by Nick Patterson and Alkes Price lab

  Language:C18159

• DReichLab/AdmixTools

  Tools test whether admixture occurred and more

  Language:C18264

• bodkan/archaic-ychr

  Repository of code for the paper "The evolutionary history of Neandertal and Denisovan Y chromosomes" by Petr et al.

  Language:Jupyter Notebook9

• jfy133/Tidy_PopGen_PCA_Plotting

  A small R notebook describing how plot common (aDNA) population genetics PCAs using R and the tidyverse.

  95

• fj-blanco/bam-to-ychr-calls

  From .bam to .csv with annotated Y-chromosome variants

  Language:Python2

• ruidlpm/pathPhynder

  A workflow for integrating ancient lineages into present-day phylogenies.

  Language:R232