TheMatrixMaster

gpt-embeddings

Use document search to make specialized chatgpt bot

hq-properties

Professional real estate agent website template with multithreaded filewatcher

luna-lung-nodule-segmentation

Using U-Net to segment lung cancer nodules from CT-scans

mmc-gene

Multimodal Contrastive Learning (CLIP, GMC) on Cell Perturbations Data

omics-guided-gfn

Using gflownets to guide molecule search with multi-omic proxy models

os-mini-projects

Small OS projects in C - Shell, pThreads, File System

react-dynamic-renderer

ReactJS module that renders flexible JSON schemas into fully interactive React components.

TheMatrixMaster

VirtualPatientBackend

Virtual Patient Back-end service for speech-to-text, text-to-speech and NLP

VirtualPatientFrontend

Virtual Patient Front-end application in reactjs to interface vocal interactions between physicians and patients.

TheMatrixMaster/omics-guided-gfn

Using gflownets to guide molecule search with multi-omic proxy models

TheMatrixMaster/luna-lung-nodule-segmentation

Using U-Net to segment lung cancer nodules from CT-scans

TheMatrixMaster/gpt-embeddings

Use document search to make specialized chatgpt bot

TheMatrixMaster/hq-properties

Professional real estate agent website template with multithreaded filewatcher

TheMatrixMaster/TheMatrixMaster

TheMatrixMaster/kattis

A collection of kattis problems that I have solved.

TheMatrixMaster/mmc-gene

Multimodal Contrastive Learning (CLIP, GMC) on Cell Perturbations Data

TheMatrixMaster/nu-label-smoothing

Non-uniform label smoothing for improved model interpretability

TheMatrixMaster/os-mini-projects

Small OS projects in C - Shell, pThreads, File System

TheMatrixMaster/react-dynamic-renderer

ReactJS module that renders flexible JSON schemas into fully interactive React components.

TheMatrixMaster/2021.thematrixmaster.github.io

2021 version of personal website

TheMatrixMaster/af_msa_subsampling

A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2

TheMatrixMaster/alphaflow

AlphaFold Meets Flow Matching for Generating Protein Ensembles

TheMatrixMaster/cNMF

Code and example data for running Consensus Non-negative Matrix Factorization on single-cell RNA-Seq data

TheMatrixMaster/course-dag

DAG visualization for courses

TheMatrixMaster/degenerate-attention

Degenerate attention blog post

TheMatrixMaster/DesignBook

Companion repository for the book "Introduction to Software Design with Java"

TheMatrixMaster/DNABERT_2

The official implementation of DNABERT-2.

TheMatrixMaster/EFAAR_benchmarking

External repo for the EFAAR benchmarking paper

TheMatrixMaster/flask_tutorial

Working with some over-powered Flask.

TheMatrixMaster/foodb-analysis

Network science on food compound database

TheMatrixMaster/GEARS

GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations

TheMatrixMaster/gflownet

GFlowNet library specialized for graph & molecular data

TheMatrixMaster/gfn-tm

Topic model inference with gflownet-em

TheMatrixMaster/lda-model

My implementation of latent dirichlet allocation model applied on mimic III

TheMatrixMaster/pytorch

Tensors and Dynamic neural networks in Python with strong GPU acceleration

TheMatrixMaster/torchgfn

GFlowNet library

TheMatrixMaster/vae-blog

Blog post on variational autoencoders with example on generating traditional chinese landscape paintings

TheMatrixMaster/variational-inference

Library implementation of variational inference with em maximization on polygenic risk prediction with spike-and-slab prior and normal likelihood

TheMatrixMaster/zep-server

Zep: A long-term memory store for LLM / Chatbot applications