Thomieh73
A microbiologist interested in microbial diversity. Here I post scripts /analyses that I find usefull for my work.
@NorwegianVeterinaryInstitute Norway
Pinned Repositories
BioinfTraining
Repository for bioinformatics training at the Norwegian Veterinary Institute
Delicious
Share your recipes - version control your recipes. I suspect most of the practical version control will be focused on cakes. But other recipes are welcome, particularly if they are excellent and take almost no time to prepare. Share your tips and tricks! We like efficiency. You can also add conversion, cooking time estimators scripts if you want … You are also most welcome to use this repository as a training tool to learn git.
Metagenomics-more
A repository on metagenomic data-analysis
NanoCLUST
NanoCLUST is an analysis pipeline for UMAP-based classification of amplicon-based full-length 16S rRNA nanopore reads
Nepal
NExtflow Pipeline for AmpLicons
nvi-documentation
ORION_HandBook
Results from ORION NGS will be documented here using ReadTheDocs
sbx_kaiju
Kaiju metagenomics classifier for Sunbeam
Talos
A shotgun metagenomic analysis pipeline using nextflow
Useful_scripts
A repository with some of my stuff that could be usefull for others.
Thomieh73's Repositories
Thomieh73/NanoCLUST
NanoCLUST is an analysis pipeline for UMAP-based classification of amplicon-based full-length 16S rRNA nanopore reads
Thomieh73/BioinfTraining
Repository for bioinformatics training at the Norwegian Veterinary Institute
Thomieh73/Delicious
Share your recipes - version control your recipes. I suspect most of the practical version control will be focused on cakes. But other recipes are welcome, particularly if they are excellent and take almost no time to prepare. Share your tips and tricks! We like efficiency. You can also add conversion, cooking time estimators scripts if you want … You are also most welcome to use this repository as a training tool to learn git.
Thomieh73/Metagenomics-more
A repository on metagenomic data-analysis
Thomieh73/Nepal
NExtflow Pipeline for AmpLicons
Thomieh73/nvi-documentation
Thomieh73/ORION_HandBook
Results from ORION NGS will be documented here using ReadTheDocs
Thomieh73/sbx_kaiju
Kaiju metagenomics classifier for Sunbeam
Thomieh73/Talos
A shotgun metagenomic analysis pipeline using nextflow
Thomieh73/Useful_scripts
A repository with some of my stuff that could be usefull for others.
Thomieh73/vc-demo