Pinned Repositories
16S_ppm_public
pipeline for 16S based taxonomic classification
atlas-gene-annotation-manipulation
Scripts for processing gene (or exon/ transcript) annotation
avra_public
Repository to predict visual rating scales of atrophy used in clinics.
Carello-Collar_GABAergicMeta-analysis
CERINA
CIRIquant
circular RNA quantification tools
cosmosR
COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data sets.
DGE_workshop_salmon_online
GP2-Beginner-Bioinformatics-for-PD-Genetics
LSLODQuery
Set of scripts to analyze the LSLOD Cloud
Tyrev's Repositories
Tyrev/LSLODQuery
Set of scripts to analyze the LSLOD Cloud
Tyrev/16S_ppm_public
pipeline for 16S based taxonomic classification
Tyrev/atlas-gene-annotation-manipulation
Scripts for processing gene (or exon/ transcript) annotation
Tyrev/avra_public
Repository to predict visual rating scales of atrophy used in clinics.
Tyrev/Carello-Collar_GABAergicMeta-analysis
Tyrev/CERINA
Tyrev/CIRIquant
circular RNA quantification tools
Tyrev/cosmosR
COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data sets.
Tyrev/DGE_workshop_salmon_online
Tyrev/GP2-Beginner-Bioinformatics-for-PD-Genetics
Tyrev/iBrain
Tyrev/Intro-to-ChIPseq
Intro to ChIPseq using HPC
Tyrev/Intro-to-rnaseq-hpc-salmon-flipped
Introduction to bulk RNA-seq
Tyrev/iscience_models_article
Tyrev/KNIFE
Known and Novel IsoForm Explorer. Statistically based splicing detection for circular and linear isoforms
Tyrev/labs
Rmd source files for the HarvardX series PH525x
Tyrev/lod-cloud
Sources for lod-cloud.net, the website of the Linked Open Data Cloud diagram
Tyrev/MapSplice
Bioinformatics software release from Jinze Liu's Bioinformatics lab @ UKy
Tyrev/minion_qc
Quality control for MinION sequencing data
Tyrev/reclassify_lactos
Reclassify Lactobacillaceae 16S amplicon sequences to the new taxonomy
Tyrev/RNCBO
Mapping ontology terms using NCBO recommender
Tyrev/scRNA-seq_online
Tyrev/scViewer
Tyrev/TAMPOR
Tunable Approach for Median Polish of Ratio -- Biological Abundance Batch Effect Removal