/DeconICA

Deconvolution of transcriptome through Immune Component Analysis

Primary LanguageMATLABGNU General Public License v2.0GPL-2.0

DeconICA

Cite with the doi

DOI

Deconvolution of transcriptome through Immune Component Analysis

AN R PACKAGE FOR IDENTIFYING IMMUNE-RELATED SIGNALS IN TRANSCRIPTOME THROUGH DECONVOLUTION OR UNSUPERVISED SOURCE SEPARATION METHODS

You can install deconICA from GitHub with:

#install.packages("devtools")
devtools::install_github("UrszulaCzerwinska/DeconICA", build_vignettes = TRUE, dependencies = TRUE)

It should be available shortly on CRAN


check out the package website: https://urszulaczerwinska.github.io/DeconICA/

more information

  • for examples and tutorial:
vignette(topic ="DeconICA_introduction", package="deconica")

or at

  • list of functions
help(package="deconica")