deconvolution
There are 246 repositories under deconvolution topic.
flatironinstitute/CaImAn
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
moabitcoin/holy-edge
Holistically-Nested Edge Detection
digitalcytometry/ecotyper
EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.
HelmchenLabSoftware/Cascade
Calibrated inference of spiking from calcium ΔF/F data using deep networks
preritj/segmentation
Tensorflow implementation : U-net and FCN with global convolution
msacchi/SeismicLab
Matlab research tools to read, write and process seismic data
harsh1795/CNN-DICOM-Segmentation
DICOM Image Segmentation with CNNs in Tensorflow
WeisongZhao/Sparse-SIM
Official MATLAB implementation of the "Sparse deconvolution" -v1.0.3
KevinMenden/scaden
Deep Learning based cell composition analysis with Scaden.
roflmaostc/DeconvOptim.jl
A multi-dimensional, high performance deconvolution framework written in Julia Lang for CPUs and GPUs.
csgwon/pytorch-deconvnet
Example of Deconvnet in PyTorch for VGG16
Biomedical-Imaging-Group/DeconvolutionLab2
Java (ImageJ/Fiji) software package for 3D deconvolution microscopy
unfoldtoolbox/Unfold.jl
Neuroimaging (EEG, fMRI, pupil ...) regression analysis in Julia
unfoldtoolbox/unfold
A matlab EEG toolbox to perform overlap correction and non-linear & linear regression.
Danko-Lab/TED
a fully Bayesian approach to deconvolve tumor microenvironment
Lukeli0425/Galaxy-Deconv
Official code for Galaxy Image Deconvolution for Weak Gravitational Lensing with Unrolled Plug-and-Play ADMM
NathanSkene/EWCE
Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.
compneuro-da/rsHRF
rsHRF: A Toolbox for Resting State HRF Deconvolution and Connectivity Analysis (MATLAB)
elgw/deconwolf
Deconvolution of widefield microscopy images and generation of point spread functions
VladKarpushin/motion_deblur
You will learn how to recover a motion blur image by Wiener filter
VladKarpushin/out_of_focus_deblur
You will learn how to recover an out-of-focus image by Wiener filter
owkin/PyDeconv
Python implementation of bulk RNAseq deconvolution algorithms
cansysbio/ConsensusTME
ConsensusTME Gene Sets and R Script
horizon-research/systolic-array-dataflow-optimizer
A general framework for optimizing DNN dataflow on systolic array
CompEpigen/methylbert
A Transformer-based model for read-level DNA methylation pattern identification and tumour deconvolution
luczeng/MotionBlur
Blind deconvolution of motion blur
MacDumi/RAMAN-Deconvolution
Deconvolution of Raman spectra
allgebrist/Causal-Deconvolution-of-Networks
Causal Deconvolution of Networks by Algorithmic Generative Models
jrbourbeau/pyunfold
Iterative unfolding for Python
zafarrafii/CQHC-Python
Constant-Q harmonic coefficients (CQHCs), a timbre feature designed for music signals.
ajitjohnson/imsig
Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours
WWXkenmo/ENIGMA
A fast and accurate deconvolution algorithm based on regularized matrix completion algorithm (ENIGMA)
wuaipinglab/ImmuCC
Cell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data.
kidanger/high-noise-deblurring
Efficient Blind Deblurring under High Noise Levels (with online demo)
HyeongseokSon1/CNN_deconvolution
CNN based non-blind deconvolution (presented at ICCP 2017)
theislab/hadge
Comprehensive pipeline for donor demultiplexing in single cell