VEuPathDB Bioinformatics Resource Center

Pinned Repositories

ApiCommonData
Language:Perl32
ApiCommonWebsite
Language:Perl31
EbrcWebsiteCommon
Language:Perl33
eda-workspace-client-core
Language:TypeScript2 27 01
EdaDataService
Language:Java20
gente
A web application for self-service LDAP password changes
Language:Perl20
humann-nextflow
run kneaddata+humann for a list of samples using nextflow
Language:Python41
MicrobiomeModel
Language:Java20
MicrobiomeWebsite
Language:R20
WDKClient
Language:JavaScript2 25 344

VEuPathDB Bioinformatics Resource Center's Repositories

VEuPathDB/ApiCommonData
Language:Perl32
VEuPathDB/ApiCommonWebsite
Language:Perl31
VEuPathDB/EbrcWebsiteCommon
Language:Perl33
VEuPathDB/ClinEpiWebsite
Language:CSS20
VEuPathDB/MicrobiomeWebsite
Language:R20
VEuPathDB/web-monorepo
A monorepo that contains all frontend code for VEuPathDB websites
Language:TypeScript2 20 5070
VEuPathDB/EbrcModelCommon
Language:Java12
VEuPathDB/SiteSearchData
WDK Model and other code needed to run a WDK and generate reports to make JSON files to index in solr
Language:Python10
VEuPathDB/WDK
Language:Java1 25 334
VEuPathDB/StaticContent
Language:HTML06
VEuPathDB/antismash-nextflow
Language:Perl
VEuPathDB/ApiCommonMetadataRepository
Git mirror of the ApiCommonMetadataRepository svn project. Commits here will be lost.
Language:Perl1
VEuPathDB/ebi2gus
Code related to representing data from E! Core workflow in GUS schema
Language:Perl
VEuPathDB/gus-site-build-deploy
Language:Shell2
VEuPathDB/install
Language:Shell25 22
VEuPathDB/job-approve-eligible-access-requests
Job to execute dataset approval endpoint on a schedule
VEuPathDB/lib-eda-subsetting
Provides Java interface to query and provide EDA data and metadata from a database
Language:Java
VEuPathDB/lib-jaxrs-container-core
Core library for VEuPathDB JaxRS container services
Language:Java
VEuPathDB/lib-rabbit-job-queue
RabbitMQ based job queue library for client and server.
Language:Kotlin
VEuPathDB/orthoFinder-nextflow
orthoFinder Nextflow workflow
Language:Python
VEuPathDB/OrthoMCLModel
Language:Java
VEuPathDB/OrthoMCLService
Project containing OrthMCL-specific services, built on Ebrc common libraries
Language:Java
VEuPathDB/OrthoMCLWebsite
VEuPathDB/service-eda
Repo containing EDA web service
Language:Java
VEuPathDB/service-mbio-wdk-oauth
Docker stack to encapsulate WDK and OAuth dependencies of MicrobiomeDB
Language:HTML
VEuPathDB/service-multi-blast
Async BLAST+ query service and supporting libraries.
Language:Kotlin26 155
VEuPathDB/vdi-component-common
Common components for VDI projects
Language:Kotlin
VEuPathDB/vdi-plugin-handler-server
VDI Service Plugin Handler Server
Language:Kotlin
VEuPathDB/vdi-plugin-isasimple
Language:Perl
VEuPathDB/vdi-service
Language:Kotlin