Pinned Repositories
bioconda-extended-base-image
An extended docker container for cases where the busybox image is too limited.
BOSS-RUNS
Dynamic, adaptive sampling during nanopore sequencing
chemprop
Message Passing Neural Networks for Molecule Property Prediction
covariants
Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
emg-viral-pipeline
VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies
ensembl-variation
The Ensembl Variation Perl API and SQL schema
ESM
evSeq
Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
galaxy-rna-workbench
Galaxy RNA workbench
NAbs
Viromic's Repositories
Viromic/galaxy-rna-workbench
Galaxy RNA workbench
Viromic/NAbs
Viromic/bioconda-extended-base-image
An extended docker container for cases where the busybox image is too limited.
Viromic/BOSS-RUNS
Dynamic, adaptive sampling during nanopore sequencing
Viromic/chemprop
Message Passing Neural Networks for Molecule Property Prediction
Viromic/covariants
Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
Viromic/emg-viral-pipeline
VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies
Viromic/ensembl-variation
The Ensembl Variation Perl API and SQL schema
Viromic/ESM
Viromic/evSeq
Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
Viromic/forgeinStrain
Bioinformatics program inStrain
Viromic/MGOverDrivE
QOPT
Viromic/FRMM-framework
prediction
Viromic/Omicron_data
Viromic/OmicronspdbsB1.1.529
Omicronspdbs B1.1.529 K21 (L21sister clade) for further processing and re- dockings
Viromic/periscope
A tool to quantify sub-genomic RNA (sgRNA) expression in SARS-CoV-2 artic network amplicon nanopore sequencing data.
Viromic/protein_lucky
Viromic/PyRosetta.notebooks
Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
Viromic/RNAFramework
RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
Viromic/SADDLE
matlab independent
Viromic/spike_genomic_and_structural_work
Viromic/template
A template for code examples on this account. See for details on contribution guidelines.
Viromic/torchani
Accurate Neural Network Potential on PyTorch
Viromic/totalviralrecall
Detection of NCLDV signatures in 'omic data
Viromic/VFTools
Viromic/VOC
Viromic/workspace-images
Ready to use docker images for Gitpod workspaces