VolodymyrChapman
PhD student: AI for subgrouping in non-Hodgkin lymphoma. Right to repairist and all-round tinkerer. 🇺🇦🇪🇺🏴 Слава Україні, Героям Слава!
University of LeedsLeeds, United Kingdom
Pinned Repositories
ANHIR_MW
Compatibility and reproducibility fork of ANHIR_MW
Automated-TIL-scoring-QuPath-Classifier-for-Melanoma
QuPath TIL classifier for Melanoma on HE slides
AutomaticColorUnmixing_VC_branch
Clone of AutomaticColorUnmixing by Daan Geijs and RUMC ComputationalPathologyGroup
Digital_pathology_tool_wiki
Collected links to useful digital pathology tools
DimRed_cross_validation
Cross Validation evaluation of dimensionality reduction methods, as proposed in this Alex Williams blog: http://alexhwilliams.info/itsneuronalblog/2018/02/26/crossval/
Encoding-genomic-sequences
Encoding genome sequences as chaos game representations (CGRs).
Encoding-sequences-with-over-4-states
Methods of encoding text and messages using Chaos Game Representations
Flutter_projects
A record of my journey from beginner to (hopefully!) wizard of Flutter app development
hovernet_inference_PyTorch
HoVer-Net inference code for simultaneous nuclear segmentation and classification (PyTorch version)
Single-Cell-RNAseq-Hackathon-2022
Winning entry to Single Cell RNAseq Hackathon 2022 (University of Leeds: https://conferences.leeds.ac.uk/bad-hackathon/)
VolodymyrChapman's Repositories
VolodymyrChapman/Digital_pathology_tool_wiki
Collected links to useful digital pathology tools
VolodymyrChapman/hovernet_inference_PyTorch
HoVer-Net inference code for simultaneous nuclear segmentation and classification (PyTorch version)
VolodymyrChapman/AutomaticColorUnmixing_VC_branch
Clone of AutomaticColorUnmixing by Daan Geijs and RUMC ComputationalPathologyGroup
VolodymyrChapman/ANHIR_MW
Compatibility and reproducibility fork of ANHIR_MW
VolodymyrChapman/Automated-TIL-scoring-QuPath-Classifier-for-Melanoma
QuPath TIL classifier for Melanoma on HE slides
VolodymyrChapman/DimRed_cross_validation
Cross Validation evaluation of dimensionality reduction methods, as proposed in this Alex Williams blog: http://alexhwilliams.info/itsneuronalblog/2018/02/26/crossval/
VolodymyrChapman/Encoding-genomic-sequences
Encoding genome sequences as chaos game representations (CGRs).
VolodymyrChapman/Encoding-sequences-with-over-4-states
Methods of encoding text and messages using Chaos Game Representations
VolodymyrChapman/Flutter_projects
A record of my journey from beginner to (hopefully!) wizard of Flutter app development
VolodymyrChapman/HistoQC
HistoQC is an open-source quality control tool for digital pathology slides
VolodymyrChapman/ICAIRD
VolodymyrChapman/Single-Cell-RNAseq-Hackathon-2022
Winning entry to Single Cell RNAseq Hackathon 2022 (University of Leeds: https://conferences.leeds.ac.uk/bad-hackathon/)
VolodymyrChapman/job_scraper
Scraping jobs into easy to filter dataframes
VolodymyrChapman/Machine-learning-on-sequence-data
Using a variety of machine learning strategies to solve classification problem using DNA sequences
VolodymyrChapman/Programming_assignments
Assignments completed for various online courses in Machine Learning and data science (in Python, MatLab, R or Kotlin)
VolodymyrChapman/QuickAnnotator
An open-source digital pathology based rapid image annotation tool
VolodymyrChapman/QuickAnnotator_infer
Infer on images using a trained QuickAnnotator model
VolodymyrChapman/splinedist
SplineDist: Automated Cell Segmentation with Spline Curves
VolodymyrChapman/thyroidclassification
VolodymyrChapman/Uncommon-musical-scales
Making shareable and playable files containing every possible scale
VolodymyrChapman/WSI_level_inference
DL model agnostic WSI inference