Pinned Repositories
BayesSpace
Bayesian model for clustering and enhancing the resolution of spatial gene expression experiments.
bayNorm
Normalization for single cell RNA-seq data
bayNorm_papercode
code for producing figures in bayNorm
bayNormJL.jl
bayNorm in Julia.
BB
:exclamation: This is a read-only mirror of the CRAN R package repository. BB — Solving and Optimizing Large-Scale Nonlinear Systems. Homepage: <U+000a>http://www.jhsph.edu/agingandhealth/People/Faculty_personal_pages/Varadhan.html
BPSC
Beta-Poisson model for single-cell RNA-seq data analyses
Julia_ABC
singleCellSeq
Batch effects and the effective design of single-cell gene expression studies
WT215's Repositories
WT215/bayNorm
Normalization for single cell RNA-seq data
WT215/bayNormJL.jl
bayNorm in Julia.
WT215/Julia_ABC
WT215/BayesSpace
Bayesian model for clustering and enhancing the resolution of spatial gene expression experiments.
WT215/BPSC
Beta-Poisson model for single-cell RNA-seq data analyses
WT215/CellChat
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
WT215/Code_Request
General R functions and scripts for publications
WT215/conv_arithmetic
A technical report on convolution arithmetic in the context of deep learning
WT215/DataDive_scRNAseq_mapping
Imperial Medical Data Dive 2019: code for preparing multiple brain single cell RNA-seq for mapping against each other
WT215/dca
Deep count autoencoder for denoising scRNA-seq data
WT215/dl-notes
WT215/examples
A set of examples around pytorch in Vision, Text, Reinforcement Learning, etc.
WT215/libpku
贵校课程资料民间整理
WT215/mapcloud
10X/SS2/spatial transcriptomics/genotyping internal cloud pipeline
WT215/nCov2019
WT215/nnRNA
WT215/One2One
This package is used to get 1:1 orthologs based on MGI homology data from http://www.informatics.jax.org/homology.shtml
WT215/pattern_prediction_NN_Shangying
Use LSTM neural network for 1D distributional data prediction
WT215/pytorch-tutorial
PyTorch Tutorial for Deep Learning Researchers
WT215/scModels
scModels is an R package for distribution fitting of discrete count distributions.
WT215/SEQ_Tung2017
Learn how to do alignment using sequence datasets from Tung 2017
WT215/SPARK
Spatially resolved transcriptomic analysis
WT215/SPATAData
The database for spatially resolved transcriptomics
WT215/Spatial_Glioma
Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper
WT215/st_pipeline
ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method in FASTQ format.
WT215/TensorFlow-Course
Simple and ready-to-use tutorials for TensorFlow
WT215/TikZ
Complete collection of my PGF/TikZ figures.
WT215/tumourMassDormancy
This repository contains the code developed for the analysis of tumour mass dormancy, immunological and angiogenic dormancy across cancers from the Cancer Genome Atlas (TCGA).
WT215/VAMPIRE_open
open source version of VAMPIRE analysis : visually-aided morpho-phenotyping recognition
WT215/WT215