XuewenWangUGA
PhD, Scientist in Genomics & bioinformatics at Uni. North Texas Health Sci Center
University of North Texas, Health Science Center CHIFort Worth, TX
Pinned Repositories
GBRU_planning
Planning of ongoing projects
GMATA
Software GMATA for SSR mining, marker designing, genotyping, plot etc.
MacroHapCaller
A bioinformatics tool in Java to Call and phase STR, SNP and InDel from NGS long read sequencing data
MacroHapDB
The macrohap allele database and tools for variant alleles with SNP, STR and InDel from humans
MacroHapHiFi
the macrohaplotype alleles data from PacBio in-house HiFi reads for "long-read sequencing interpretates forensic DNA mixture"project , funding by Dept of Justice
PanGenome
PanGenome analysis scripts
PERJ
Paired-End Reads Joining
TRcaller
A breakthrough bioinformatics tool TRcaller in Java: the fastest and most accurate STR/SSR/TR genotyping tool
USAT
Universal STR Allele Toolkit (USAT) for viewing and comparison
VarSeqStitcher
A novel bioinformatics tool in Java to build phased long alleles of STR+SNP+InDel from VCF file
XuewenWangUGA's Repositories
XuewenWangUGA/GMATA
Software GMATA for SSR mining, marker designing, genotyping, plot etc.
XuewenWangUGA/USAT
Universal STR Allele Toolkit (USAT) for viewing and comparison
XuewenWangUGA/TRcaller
A breakthrough bioinformatics tool TRcaller in Java: the fastest and most accurate STR/SSR/TR genotyping tool
XuewenWangUGA/MacroHapCaller
A bioinformatics tool in Java to Call and phase STR, SNP and InDel from NGS long read sequencing data
XuewenWangUGA/VarSeqStitcher
A novel bioinformatics tool in Java to build phased long alleles of STR+SNP+InDel from VCF file
XuewenWangUGA/GBRU_planning
Planning of ongoing projects
XuewenWangUGA/MacroHapDB
The macrohap allele database and tools for variant alleles with SNP, STR and InDel from humans
XuewenWangUGA/MacroHapHiFi
the macrohaplotype alleles data from PacBio in-house HiFi reads for "long-read sequencing interpretates forensic DNA mixture"project , funding by Dept of Justice
XuewenWangUGA/PanGenome
PanGenome analysis scripts
XuewenWangUGA/PERJ
Paired-End Reads Joining
XuewenWangUGA/pRMNE
The probability of Not Excluding a Random Man based on evidence alleles and population databases
XuewenWangUGA/RNA-seq_analysis_R
XuewenWangUGA/SeqReadsProcessing
Tools for short and long next generation sequencing reads processing
XuewenWangUGA/snpAP
A bioinformatic tool to calculate the Phred-scaled likelihood PL of snp alleles
XuewenWangUGA/StrPhaser
The novel bioinformatics tool for building phased STR allelic sequences from VCF file
XuewenWangUGA/UncariaRhynchophylla
scripts and code for genome paper