Pinned Repositories
3DVesselSegNet
hybrid representation learning approach for fully automatic and template-free vessel centerline extraction
DGLSB
Deep Generative Learning via Schrödinger Bridge
LOG-TRAM
mfair
mfair: Matrix Factorization with Auxiliary Information in R
MR-APSS
Mendelian Randomization accounting for Pleiotropy and Sample Structure using genome-wide summary statistics
Portal
Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets
SpatialScope
A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models
STitch3D
Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices
XMAP
XPASS
Cross-population analysis using GWAS summary statistics
YangLab@HKUST's Repositories
YangLabHKUST/STitch3D
Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices
YangLabHKUST/SpatialScope
A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models
YangLabHKUST/MR-APSS
Mendelian Randomization accounting for Pleiotropy and Sample Structure using genome-wide summary statistics
YangLabHKUST/Portal
Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets
YangLabHKUST/XPASS
Cross-population analysis using GWAS summary statistics
YangLabHKUST/DGLSB
Deep Generative Learning via Schrödinger Bridge
YangLabHKUST/LOG-TRAM
YangLabHKUST/XMAP
YangLabHKUST/3DVesselSegNet
hybrid representation learning approach for fully automatic and template-free vessel centerline extraction
YangLabHKUST/mfair
mfair: Matrix Factorization with Auxiliary Information in R
YangLabHKUST/PALM
YangLabHKUST/FLAG
Flexible and Accurate Methods for Estimation and Inference of Gaussian Graphical Models with Applications
YangLabHKUST/MATH-4432-Statistical-Machine-Learning
Tutorials for MATH 4432 Statistical Machine Learning, HKUST, Fall 2023
YangLabHKUST/MRbenchmarking
YangLabHKUST/MRAPSS_RealDataAnalysis_reproduce
R code for reproduce real data analysis in MRAPSS paper.
YangLabHKUST/SRT_alignment_and_integration
Measurement and comparison of several slices aligning methods and data integrating mathods for spatial transcriptomics data using several ST datasets.
YangLabHKUST/VCM
R package VCM contains three approaches for solving variance components model: PX-EM algorithm, MM algorithm and Method of Moments
YangLabHKUST/VGrow-Pg
A tensorflow implementation of VGrow by using progressive growing method.
YangLabHKUST/XPA
Cross-population analysis using the individual-level GWAS data
YangLabHKUST/iGREX
Quantifying the impact of genetically regulated expression on complex traits and diseases
YangLabHKUST/scPI
scPI: A scalable framework for probabilistic inference insingle-cell RNA-sequencing data analysis
YangLabHKUST/XPXP
YangLabHKUST/BWMR
BWMR (Bayesian Weighted Mendelian Randomization)
YangLabHKUST/FIRM
Fast Integration of single-cell RNA-sequencing data across Multiple platforms
YangLabHKUST/GPU-LMM
YangLabHKUST/LPM
Efficient statistical approach to characterize relationship among complex traits using summary statistics from multiple GWASs and functional annotations
YangLabHKUST/LPM-sim
Simulation codes to reproduce the results in the LPM paper
YangLabHKUST/LSMM-sim
Simulation codes and example to reproduce the results in the LSMM paper
YangLabHKUST/SpatialScope-Beta
YangLabHKUST/ucs
Code for Unified approach to cell segmentation for spatially resolved transcriptomics