/SSR

SSR: A Unifed Framework for Prediction in Secondary Structure of RNA. 整合了LinearFold, E2Efold, MXfold2算法，包含数据集，欢迎一键使用。

Primary LanguagePython

SSR: A Unifed Framework for Prediction in Secondary Structure of RNA

Yanjie Ze*, Qi Liu*, Xudong Lu*

This is the official code for final project of CS410: AI.

mxfold2和linear fold编译过程

cd novafold/models/mxfold2/src/
git submodule update --init
rm -rf CMakeFiles
rm CMakeCache.txt
rm cmake_install.cmake
mkdir build
cd build
cmake ..
make

用script跑样例

sh scripts/train_mxfold2.sh