Error in if (class(matCountData) == "SummarizedExperiment") { : the condition has length > 1

[DUAN-GAO]

Guys,
I encountered following error,

ImpulseDE2 for count data, v1.6.1

Process input

Error in if (class(matCountData) == "SummarizedExperiment") { :
the condition has length > 1
Timing stopped at: 0 0 0

could u help, many thanks.

─ Session info ───────────────────────────────────────────────────────
setting value
version R version 4.2.2 (2022-10-31 ucrt)
os Windows 10 x64 (build 19041)
system x86_64, mingw32
ui RStudio
language (EN)
collate Chinese (Simplified)_China.utf8
ctype Chinese (Simplified)_China.utf8
tz Asia/Taipei
date 2023-05-30
rstudio 2023.03.0+386 Cherry Blossom (desktop)
pandoc NA

─ Packages ───────────────────────────────────────────────────────────
package * version date (UTC) lib source
annotate 1.76.0 2022-11-03 [1] Bioconductor
AnnotationDbi 1.60.2 2023-03-10 [1] Bioconductor
Biobase 2.58.0 2022-11-01 [1] Bioconductor
BiocGenerics 0.44.0 2022-11-01 [1] Bioconductor
BiocParallel 1.32.6 2023-03-17 [1] Bioconductor
Biostrings 2.66.0 2022-11-01 [1] Bioconductor
bit 4.0.5 2022-11-15 [1] CRAN (R 4.2.2)
bit64 4.0.5 2020-08-30 [1] CRAN (R 4.2.2)
bitops 1.0-7 2021-04-24 [1] CRAN (R 4.2.0)
blob 1.2.4 2023-03-17 [1] CRAN (R 4.2.3)
cachem 1.0.8 2023-05-01 [1] CRAN (R 4.2.3)
circlize 0.4.15 2022-05-10 [1] CRAN (R 4.2.3)
cli 3.6.1 2023-03-23 [1] CRAN (R 4.2.3)
clue 0.3-64 2023-01-31 [1] CRAN (R 4.2.3)
cluster 2.1.4 2022-08-22 [1] CRAN (R 4.2.2)
codetools 0.2-19 2023-02-01 [1] CRAN (R 4.2.2)
colorspace 2.1-0 2023-01-23 [1] CRAN (R 4.2.2)
ComplexHeatmap * 2.14.0 2022-11-01 [1] Bioconductor
cowplot 1.1.1 2020-12-30 [1] CRAN (R 4.2.2)
crayon 1.5.2 2022-09-29 [1] CRAN (R 4.2.2)
DBI 1.1.3 2022-06-18 [1] CRAN (R 4.2.2)
DelayedArray 0.24.0 2022-11-01 [1] Bioconductor
DESeq2 1.38.3 2023-01-19 [1] Bioconductor
digest 0.6.31 2022-12-11 [1] CRAN (R 4.2.2)
doParallel 1.0.17 2022-02-07 [1] CRAN (R 4.2.2)
dplyr 1.1.2 2023-04-20 [1] CRAN (R 4.2.3)
fansi 1.0.4 2023-01-22 [1] CRAN (R 4.2.2)
fastmap 1.1.1 2023-02-24 [1] CRAN (R 4.2.2)
foreach 1.5.2 2022-02-02 [1] CRAN (R 4.2.2)
geneplotter 1.76.0 2022-11-01 [1] Bioconductor
generics 0.1.3 2022-07-05 [1] CRAN (R 4.2.2)
GenomeInfoDb 1.34.9 2023-02-02 [1] Bioconductor
GenomeInfoDbData 1.2.9 2023-02-17 [1] Bioconductor
GenomicRanges 1.50.2 2022-12-27 [1] Bioconductor
GetoptLong 1.0.5 2020-12-15 [1] CRAN (R 4.2.3)
ggplot2 * 3.4.2 2023-04-03 [1] CRAN (R 4.2.3)
GlobalOptions 0.1.2 2020-06-10 [1] CRAN (R 4.2.3)
glue 1.6.2 2022-02-24 [1] CRAN (R 4.2.2)
gtable 0.3.3 2023-03-21 [1] CRAN (R 4.2.3)
httr 1.4.6 2023-05-08 [1] CRAN (R 4.2.3)
ImpulseDE2 * 1.6.1 2019-01-04 [1] Bioconductor
IRanges 2.32.0 2022-11-01 [1] Bioconductor
iterators 1.0.14 2022-02-05 [1] CRAN (R 4.2.2)
KEGGREST 1.38.0 2022-11-01 [1] Bioconductor
knitr 1.43 2023-05-25 [1] CRAN (R 4.2.2)
lattice 0.21-8 2023-04-05 [1] CRAN (R 4.2.3)
lifecycle 1.0.3 2022-10-07 [1] CRAN (R 4.2.2)
locfit 1.5-9.7 2023-01-02 [1] CRAN (R 4.2.2)
magrittr 2.0.3 2022-03-30 [1] CRAN (R 4.2.2)
Matrix 1.5-4.1 2023-05-18 [1] CRAN (R 4.2.3)
MatrixGenerics 1.10.0 2022-11-01 [1] Bioconductor
matrixStats 0.63.0 2022-11-18 [1] CRAN (R 4.2.2)
memoise 2.0.1 2021-11-26 [1] CRAN (R 4.2.2)
munsell 0.5.0 2018-06-12 [1] CRAN (R 4.2.2)
pillar 1.9.0 2023-03-22 [1] CRAN (R 4.2.3)
pkgconfig 2.0.3 2019-09-22 [1] CRAN (R 4.2.2)
png 0.1-8 2022-11-29 [1] CRAN (R 4.2.2)
R6 2.5.1 2021-08-19 [1] CRAN (R 4.2.2)
RColorBrewer 1.1-3 2022-04-03 [1] CRAN (R 4.2.0)
Rcpp 1.0.10 2023-01-22 [1] CRAN (R 4.2.2)
RCurl 1.98-1.12 2023-03-27 [1] CRAN (R 4.2.3)
rjson 0.2.21 2022-01-09 [1] CRAN (R 4.2.0)
rlang 1.1.1 2023-04-28 [1] CRAN (R 4.2.3)
RSQLite 2.3.1 2023-04-03 [1] CRAN (R 4.2.3)
rstudioapi 0.14 2022-08-22 [1] CRAN (R 4.2.2)
S4Vectors 0.36.2 2023-02-26 [1] Bioconductor
scales 1.2.1 2022-08-20 [1] CRAN (R 4.2.2)
sessioninfo 1.2.2 2021-12-06 [1] CRAN (R 4.2.2)
shape 1.4.6 2021-05-19 [1] CRAN (R 4.2.0)
SummarizedExperiment 1.28.0 2022-11-01 [1] Bioconductor
tibble 3.2.1 2023-03-20 [1] CRAN (R 4.2.2)
tidyselect 1.2.0 2022-10-10 [1] CRAN (R 4.2.2)
utf8 1.2.3 2023-01-31 [1] CRAN (R 4.2.2)
vctrs 0.6.2 2023-04-19 [1] CRAN (R 4.2.3)
withr 2.5.0 2022-03-03 [1] CRAN (R 4.2.2)
xfun 0.39 2023-04-20 [1] CRAN (R 4.2.3)
XML 3.99-0.14 2023-03-19 [1] CRAN (R 4.2.2)
xtable 1.8-4 2019-04-21 [1] CRAN (R 4.2.2)
XVector 0.38.0 2022-11-01 [1] Bioconductor
zlibbioc 1.44.0 2022-11-01 [1] Bioconductor

[1] C:/Program Files/R/R-4.2.2/library