YuLab-SMU/ChIPseeker

annotatePeak using multiple cores?

kelly-sovacool opened this issue · 0 comments

When running annotatePeak() on an HPC, the process used more cores than I had allocated and was thus killed by the job scheduler. I noticed that you added ncpus/mc.cores arguments to various functions (#110), but not to annotatePeak(). Does annotatePeak() call any functions that use multiple cores? If so, can you add this option to annotatePeak() and propagate it to those functions so this can work on HPCs?