aababc1

Biologist studying microbiology

MGSSB

Pinned Repositories

dash_MAG
interactive dash app for genome selection
Language:Python0 1 00
metaFun
scalable and agile analysis pipeline for metagenomic and comparative gneomic analysis
Language:Nextflow0 1 00
metaFun-doc
Language:HTML0 1 00
Microbiome_analysis_pipeline
0 1 00
ggCaller
Bifrost graph gene caller.
Language:C++88 3 306
PPanGGOLiN
Build a partitioned pangenome graph from microbial genomes
Language:Python243 13 14530
panfeed
A k-mer counter that streams gene-cluster specific k-mers, while keeping k-mer positional information. Useful for microbial GWAS analyses with higher interpretability.
Language:Python8 3 10
gtdb-taxdump
GTDB taxonomy taxdump files with trackable TaxIds
Language:R49 6 82
kmcp
Accurate metagenomic profiling && Fast large-scale sequence/genome searching
Language:Go182 6 4813

aababc1's Repositories

aababc1/dash_MAG
interactive dash app for genome selection
Language:Python0 1 00
aababc1/metaFun
scalable and agile analysis pipeline for metagenomic and comparative gneomic analysis
Language:Nextflow0 1 00
aababc1/metaFun-doc
Language:HTML0 1 00
aababc1/Microbiome_analysis_pipeline
0 1 00