aarmey

aarmey's Stars

• astral-sh/ruff

  An extremely fast Python linter and code formatter, written in Rust.

  Language:Rust34.3k855.8k1.2k

• Cinnamon/kotaemon

  An open-source RAG-based tool for chatting with your documents.

  Language:Python19.3k1103381.5k

• mwouts/jupytext

  Jupyter Notebooks as Markdown Documents, Julia, Python or R scripts

  Language:Python6.7k72686392

• Nukesor/pueue

  :stars: Manage your shell commands.

  Language:Rust5.2k21345135

• biopython/biopython

  Official git repository for Biopython (originally converted from CVS)

  Language:Python4.4k1691.7k1.8k

• scverse/scanpy

  Single-cell analysis in Python. Scales to >1M cells.

  Language:Python2k501.8k607

• probcomp/Gen.jl

  A general-purpose probabilistic programming system with programmable inference

  Language:Julia1.8k76300161

• bugbakery/audapolis

  an editor for spoken-word audio with automatic transcription

  Language:TypeScript1.7k2925642

• google/jaxopt

  Hardware accelerated, batchable and differentiable optimizers in JAX.

  Language:Python9421820867

• MikeInnes/diff-zoo

  Differentiation for Hackers

  Language:Julia77119765

• scverse/anndata

  Annotated data.

  Language:Python58914742157

• burghoff/Scientific-Inkscape

  Scientific Inkscape: Inkscape extensions for figure resizing and editing

  Language:Python54881821

• manubot/rootstock

  Clone me to create your Manubot manuscript

  Language:HTML45319257181

• manubot/manubot

  Python utilities for Manubot: Manuscripts, open and automated

  Language:Python4351615142

• tlack/atree

  Stevan Apter-style trees in C++17

  Language:C++370719

• GiggleLiu/NiLang.jl

  A differential eDSL that can run faster than light and go back to the past.

  Language:Julia248112816

• larryboyko/dimityjones

  electronic escape novel requiring readers to solve puzzles before reading the next chapter

  89306

• shooting-unicorns/dotfiles

  Hack away :)

  Language:Vim Script78107

• JuliaLinearAlgebra/NonNegLeastSquares.jl

  Some nonnegative least squares solvers in Julia

  Language:Julia4771812

• yunjhongwu/TensorDecompositions.jl

  A Julia implementation of tensor decomposition algorithms

  Language:Julia4581216

• fides-dev/fides

  Trust Region Optimization in Python

  Language:Python273184

• benchopt/template_benchmark

  Language:Python256619

• MarieRoald/matcouply

  Learning coupled matrix factorizations in Python

  Language:Python11204

• melissawm/skprocrustes

  scikit-procrustes, a collection of solvers for the (Weighted) Orthogonal Procrustes Problem

  Language:Jupyter Notebook114303

• vz415/lfiax

  Language:Python11300

• TU-Ilmenau-CRL/SECSI

  Demo implementation for the SEmi-algebraic framework for the approximate CP decompositions via SImultaneous Matrix Diagonalizations (SECSI).

  Language:MATLAB9203

• aarmey/ml-for-bioe

  Materials for BE 175 at UCLA.

  Language:Jupyter Notebook513218

• meyer-lab/FcRegression.jl

  Study Fc antibody dynamics using a multivalent binding model

  Language:Julia22460

• andersen-lab/VIC-Analysis

  Data Analysis for VIC

  1302

• mikgrasis/C-SECSI-Minimal

  A minimal implementation for coupled decomposition of three-way tensors using the C-SECSI framework.

  Language:MATLAB1101