abchapman93
Clinical data scientist & NLP engineer. Biostatistics PhD student
University of UtahSalt Lake City, UT
Pinned Repositories
BMI_Prob_Stats
Introduction to Probability and Statistics - BMI
info_3700_fall_2020
Class repository for UVU's Fall 2020 Health Informatics Fundamentals (INFO-3700)
info_3700_spring_2021
Class repository for UVU's INFO-3700 Health Informatics Fundamentals
medspacy_pneumonia
Flexible NLP pipeline for identifying pneumonia in across clinical settings and institutions.
medspacy_template
Template for designing rule-based clinical NLP systems with medspaCy
Melbourne_COMP90089_NLP
PHS_Data_Science_2022
Repository for University of Utah's Department of Population Health Sciences 2022 Data Science Workshop
ReHouSED
NLP system for identifying patient housing status in Veteran Affairs
VA_COVID-19_NLP_BSV
An NLP pipeline for COVID-19 surveillance used in the Department of Veterans Affairs Biosurveillance.
medspacy
Library for clinical NLP with spaCy.
abchapman93's Repositories
abchapman93/info_3700_fall_2020
Class repository for UVU's Fall 2020 Health Informatics Fundamentals (INFO-3700)
abchapman93/BMI_Prob_Stats
Introduction to Probability and Statistics - BMI
abchapman93/cycontext_old
A Python implementation of the ConText algorithm for clinical text concept assertion using the spaCy framework
abchapman93/fcFinder
fcFinder package for identifying fluid collections utilizing pyConText
abchapman93/info_3700_spring_2020
Class repository for Utah Valley University INFO 3700 Spring 2020 course
abchapman93/machine_learning_examples
A collection of machine learning examples and tutorials.
abchapman93/MADE_relations
This is the repository for the MADE 1.0 ADE relation extractions task.
abchapman93/mimic34md2020_materials
abchapman93/spacy_models
abchapman93/abc_pymusic
abchapman93/abchapman93
abchapman93/BMI_Foundations_Diabetes_ML
Demonstration of using machine learning to predict diabetes for University of Utah DBMI Foundations of Healthcare Informatics class
abchapman93/bucher_lab
Code for projects led by Dr. Brian Bucher
abchapman93/decart_deep_learning
abchapman93/DSS
This repository contains the package for the Data Science Scholars course.
abchapman93/eHOST-mk5.1
abchapman93/Epi_Ideas_NLP_Tutorial
NLP tutorial with spaCy for the Salt Lake City IDEAS Epi Journal Club
abchapman93/FHI_Hands_on
A demonstration project of using pyConText to identify the patients with family history of breast cancer and/or colon cancer. It includes sentence segmentation, pyConText, document classification(rule-based) and visualization.
abchapman93/gensim
Topic Modelling for Humans
abchapman93/hai_detect
abchapman93/machine_learning_final
Repository for the Machine Learning Final Project
abchapman93/MachineLearning
abchapman93/Medspacy-Streamlit-App
abchapman93/new-entry-mini-app
abchapman93/nlp_downtown_coding_slc
A hands-on demo of Natural Language Processing for the Downtown Coding SLC MeetUp
abchapman93/nlp_tools
abchapman93/PyRuSH
init
abchapman93/regex_matcher
abchapman93/stats_final_project
abchapman93/thinkster-django-angular-boilerplate
Boilerplate for the Thinkster.io Django and AngularJS tutorial.