# Y-tools ## Toolkit for analysis of immune repertoires ### Version: see VERSION Developed in Center for Algorithmic Biotechnology, Saint Petersburg State University #### Current contributors: * Yana Safonova * Alexander Shlemov * Andrey Bzikadze * Sergey Bankevich * Andrey Slabodkin * Alla Lapidus * Pavel A. Pevzner #### Also contributed: * Eugene Kurpilyansky * Ekaterina Starostina Installation instructions and manual can be found on the website: <http://cab.spbu.ru/software/y-tools/> #### References: * __IgReC / BarcodedIgReC / IgQUAST / IgDiversityAnalyzer:__ Alexander Shlemov, Sergey Bankevich, Andrey Bzikadze, Dmitry Chudakov, Yana Safonova, and Pavel A. Pevzner. _Reconstructing antibody repertoires from error-prone immunosequencing datasets._ J Immunol October 4, 2017, ji1700485; DOI: <https://doi.org/10.4049/jimmunol.1700485> * __Immunoproteogenomics search / DSF:__ Yana Safonova, Stefano Bonissone, Eugene Kurpilyansky, Ekaterina Starostina, Alla Lapidus, Jeremy Stinson, Laura DePalatis, Wendy Sandoval, Jennie Lill and Pavel A. Pevzner. _IgRepertoireConstructor: a novel algorithm for antibody repertoire construction and immunoproteogenomics analysis._ Bioinformatics. 2015 Jun 15;31(12):i53-i61.