/pyEnsemblGeneId2GeneNameMassConvert

Mass conversions of Ensembl GeneID data Gene Name

Primary LanguagePythonBSD 3-Clause "New" or "Revised" LicenseBSD-3-Clause

pyEnsemblGeneId2GeneNameMassConvert

Returns tabular files containing Gene Name and Id from files containing Ensembl GeneId data. Suitable for mass conversions. Uses pandas and biothings_client.

Author: A. Corbetta, 2020 - http://corbetta.phys.tue.nl

Use as

python geneidconverter.py <input_file>

example

Dependencies

pip install pandas biothings_client