/accessoryfunctions

Frequently used functions

Primary LanguagePythonMIT LicenseMIT

#AccessoryFunctions

###Commonly used functions stored in a handy repo. These useful functions include:

  • Metadata and Genobject creation
  • Folder/subfolder creation with some error handling
  • MakeBLASTdb
  • Multifasta file creation from individual .fasta files
  • Relative symlinker (probably needs to be revised)
  • Strain name determination from .fastq(.gz) files with varied naming conventions
  • Printtime: prints elapsed time and message in bold
  • Other, deprecated functions