adiezsanchez
Passionate about peering into the microscopic world 🔬 💻📊 Python coder by day, data enthusiast by night 🌙 ⚔️W40K nerd
NTNU, Centre for Molecular Inflammation Research (CEMIR)Trondheim, Norway
adiezsanchez's Stars
poloclub/cnn-explainer
Learning Convolutional Neural Networks with Interactive Visualization.
SkalskiP/courses
This repository is a curated collection of links to various courses and resources about Artificial Intelligence (AI)
NirDiamant/GenAI_Agents
This repository provides tutorials and implementations for various Generative AI Agent techniques, from basic to advanced. It serves as a comprehensive guide for building intelligent, interactive AI systems.
bnsreenu/python_for_microscopists
https://www.youtube.com/channel/UC34rW-HtPJulxr5wp2Xa04w?sub_confirmation=1
AssemblyAI-Community/ML-Study-Guide
Minimal Machine Learning Study Plan
royerlab/napari-chatgpt
A napari plugin to process and analyse images with chatGPT!
scottleibrand/gpt-summarizer
Extract text from PDF, summarize each section w/ GPT, and provide a summarized outline of the paper
haesleinhuepf/stackview
Interactive image stack viewing in jupyter notebooks based on ipycanvas and ipywidgets
BiaPyX/BiaPy
Open source Python library for building bioimage analysis pipelines
HenriquesLab/DL4MicEverywhere
Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images
weigertlab/spotiflow
Accurate and efficient spot detection for microscopy data
haesleinhuepf/napari-accelerated-pixel-and-object-classification
GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.
BiAPoL/PoL-BioImage-Analysis-TS-GPU-Accelerated-Image-Analysis
PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track
imagej/napari-imagej
Use ImageJ functionality from napari
haesleinhuepf/napari-segment-blobs-and-things-with-membranes
A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/or membranes.
BiAPoL/imagej-macro-cheat-sheet
dlmbl/DL-MBL-2024
zeissmicroscopy/ZEN_Python_OAD_workshop
Material to showcase and test several tools and packages releated to ZEN, CZI image files and python packages related to those topics
ved-sharma/HyperStackReg
An ImageJ/FIJI plugin for multi-channel Hyperstack alignment (registration)
sebi06/czitools
This repository provides a collection of tools to simplify reading CZI (Carl Zeiss Image) pixel and metadata in Python. In addition it also contains other useful utilities to visualize CZI images inside Napari.
CamachoDejay/Teaching-ImageJ-FIJI
True-North-Intelligent-Algorithms/deconvolution-gpu-dl-course
Course: Exploring the Intersection of Deconvolution, GPU Computing, and Deep Learning
BiAPoL/on_the_fly_image_processing_napari
bioimage-io/AdvanceImageAnalysisEMBO2023
CellMigrationLab/Plot-Stats
Jupiter notebooks created to help us plot and analyse our datasets
ctr26/pytorch_tutorial
pyTorch demo(s)
dlegland/image-analysis-practical-2023
ome/EMBL-EBI-imaging-course-04-2024
LSeu-Open/awesome-biological-image-analysis
A curated list of softwares, tools, pipelines, plugins etc. for image analysis related to biological questions.
Laboratory-Imaging/JOBS-examples
Examples of JOBS recipes. JOBS is a smart image acquisition engine in NIS-Elements.