adnaniazi/tailfindr

Error in dyn.load

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Hello,

I am trying to run tailfindr on cluster and I got the fellowing error:

library(tailfindr) > df <- find_tails(fast5_dir = system.file('extdata', 'rna', package = 'tailfindr'), + save_dir = '~/Downloads', + csv_filename = 'rna_tails.csv', + num_cores = 2) ─────────────────────────────────────────────────────────────────────────────────────────── ── Started tailfindr (version 1.4) ──────────────────────────────────────────────────────── ─────────────────────────────────────────────────────────────────────────────────────────── ☰ You have configured tailfindr as following: ❯ fast5_dir: /share/apps/conda/environments/r-4.2.3/lib/R/library/tailfindr/extdata/rna ❯ save_dir: ~/Downloads ❯ csv_filename: rna_tails.csv ❯ num_cores: 2 ❯ basecall_group: Basecall_1D_000 ❯ save_plots: FALSE ❯ plot_debug_traces: FALSE ❯ plotting_library: rbokeh ── Processing started at 2023-12-12 18:00:18 ────────────────────────────────────────────── • Searching for all Fast5 files... Done! Found 5 Fast5 files. • Analyzing a single Fast5 file to assess if your data is in an acceptable format... Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/share/apps/conda/environments/r-4.2.3/lib/R/library/hdf5r/libs/hdf5r.so': /share/apps/22.04/spack/spack-v0.19.1/opt/spack/linux-ubuntu22.04-x86_64_v2/gcc-11.3.0/openssl-3.0.7-j6ugn2wzlb46pux5wcb65bxnmouw3jsq/lib64/libssl.so.3: version `OPENSSL_3.2.0' not found (required by /share/apps/conda/environments/r-4.2.3/lib/R/library/hdf5r/libs/../../../.././libcurl.so.4)

 

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Could you please help me with this? Thank you!