Pinned Repositories
aas-extended-examples
A collection of notebooks used in the tutorials for the applied analytic statistics course in 2020
epi-sim
A library for simulating epidemics, with a focus on phylodynamics and observation models.
github-tutorial
A tutorial on the use of git, and GitHub for open and reproducible science. See the live version of this here: https://aezarebski.github.io/misc/github-tutorial/README.html
nicemacs
configuration for spacemacs
timtam
Code to carry out the computational experiments described in the manuscript "A computationally tractable birth-death model that combines phylogenetic and epidemiological data"
timtam-calibration-study
timtam-tajikistan
timtam2
This repository is an implementation of the TimTam likelihood as a BEAST2 package.
timtamslamR
functions to make it easier to work with the timtam BEAST2 package
vegacookbook
A port of the BBC ggplot2 cookbook into vega and vegalite
aezarebski's Repositories
aezarebski/vegacookbook
A port of the BBC ggplot2 cookbook into vega and vegalite
aezarebski/oxcovid19
An R API to the Oxford COVID-19 Database
aezarebski/aezarebski
This content appears on my GitHub profile.
aezarebski/examples
Examples on the use of covid19db database
aezarebski/mighty-metropolis
The classic Metropolis sampling algorithm.
aezarebski/mvp-notes-and-ideas
Repository for the output of initial discussions regarding an MVP
aezarebski/competitive-mixtures
aezarebski/covid-19-testing-data
Data set of testing data from the COVID19 pandemic.
aezarebski/nCoV2019
Location for summaries and analysis of data related to n-CoV 2019, first reported in Wuhan, China