Pinned Repositories
2014-11-27-elixiruk-manchester
jsonldschema
Functionality to deal with JSON schemas for JSON-LD instances
mtbls2
Development of Arabidopsis dataset for www.ebi.ac.uk/metabolights
OntoMaton
OntoMaton facilitates ontology search and tagging functionalities within Google Spreadsheets.
Risa
Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Currently, data generated from microarray and flow cytometry assays are supported. The package is extendable, and efforts are undergoing to support metadata associated to proteomics and metabolomics-based assays (i.e. mass spectrometry).
robot
ROBOT is an OBO Tool
stato
The STATistics Ontology
schema
DATS JSON schemas
icat.server
The ICAT server offering both SOAP and "RESTlike" interfaces to a metadata catalog.
datagateway
DataGateway is a portal that supports discovery and access large science facilities data. It is developed as a plugin for SciGateway
agbeltran's Repositories
agbeltran/mtbls2
Development of Arabidopsis dataset for www.ebi.ac.uk/metabolights
agbeltran/2014-11-27-elixiruk-manchester
agbeltran/stato
The STATistics Ontology
agbeltran/COPO
Collaborative Open Plant Omics
agbeltran/datacarpentry
Data Carpentry workshop materials
agbeltran/HCLSDatasetDescriptions
agbeltran/HCLSValidator
Validator for HCLS dataset descriptions
agbeltran/isa2owl
Package to convert ISA-TAB files into an OWL ontology.
agbeltran/ISAconfigurator
The ISAconfigurator allows for creation of XML files (configuration files) used to build spreadsheets in the ISAcreator and for validation in the creator and ISAvalidation code. Led by Eamonn Maguire, Philippe Rocca-Serra (Uni. of Oxford).
agbeltran/ISAcreator
ISAcreator is a Java desktop application which allows for creation and editing of ISATab files. Led by Eamonn Maguire, Alejandra Gonzalez-Beltran and Philippe Rocca-Serra (Uni. of Oxford).
agbeltran/ISAtabErrorReporter
A GUI to display ISAtab errors, showing images of files and listing the errors clearly.
agbeltran/ISAvalidator-ISAconverter-BIImanager
The ISAvalidator, ISA converter and BII data manager tools
agbeltran/jnlp
agbeltran/markup
The code we use to render README.your_favorite_markup
agbeltran/mtblsHops
The ISAtab and supporting information for the data behind DOI 10.1007/s11306-011-0335-y
agbeltran/nanopub-java
Java library for nanopublications based on Sesame
agbeltran/nmrML
NMR-ML is an open mark-up language for NMR data.
agbeltran/obi-experiment
Experiments with OBI modelling
agbeltran/shexypy
ShEx parser and interpreter in Python
agbeltran/soapdenovo2
agbeltran/term-enrichment-protocol
Documentation on REST API and JSON payload for term enrichment services
agbeltran/xcms
This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis